RNA–Protein interactions for RNA: ENST00000309157.8

RORA-202, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best) BASIC

Gene RORA, Length 1,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-202ENST00000309157 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
RORA-202ENST00000309157 ABCC9O60706 1549 aa15.42■□□□□ 0.06
RORA-202ENST00000309157 CCDC180Q9P1Z9 1646 aa15.36■□□□□ 0.05
RORA-202ENST00000309157 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
RORA-202ENST00000309157 MYT1Q01538 1121 aa14.75□□□□□ -0.05
RORA-202ENST00000309157 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
RORA-202ENST00000309157 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
RORA-202ENST00000309157 NACADO15069 1562 aa14.49□□□□□ -0.09
RORA-202ENST00000309157 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
RORA-202ENST00000309157 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
RORA-202ENST00000309157 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
RORA-202ENST00000309157 ZCCHC6Q5VYS8 1495 aaKnown RBP14.32□□□□□ -0.12
RORA-202ENST00000309157 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.13
RORA-202ENST00000309157 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
RORA-202ENST00000309157 TTBK1Q5TCY1 1321 aaPredicted RBP14.2□□□□□ -0.14
RORA-202ENST00000309157 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
RORA-202ENST00000309157 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
RORA-202ENST00000309157 CC2D2AQ9P2K1 1620 aa13.9□□□□□ -0.18
RORA-202ENST00000309157 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
RORA-202ENST00000309157 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
RORA-202ENST00000309157 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
RORA-202ENST00000309157 HRCP23327 699 aa13.7□□□□□ -0.22
RORA-202ENST00000309157 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
RORA-202ENST00000309157 ATAD2BQ9ULI0 1458 aa13.43□□□□□ -0.26
RORA-202ENST00000309157 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
RORA-202ENST00000309157 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
RORA-202ENST00000309157 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
RORA-202ENST00000309157 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
RORA-202ENST00000309157 BAZ1AQ9NRL2 1556 aaPredicted RBP13.35□□□□□ -0.27
RORA-202ENST00000309157 SMARCA2P51531 1590 aa13.33□□□□□ -0.27
RORA-202ENST00000309157 NESP48681 1621 aa13.31□□□□□ -0.28
RORA-202ENST00000309157 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
RORA-202ENST00000309157 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
RORA-202ENST00000309157 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
RORA-202ENST00000309157 PEG3Q9GZU2 1588 aa13.25□□□□□ -0.29
RORA-202ENST00000309157 WIZO95785 1651 aa13.23□□□□□ -0.29
RORA-202ENST00000309157 APLP2Q06481 763 aa13.23□□□□□ -0.29
RORA-202ENST00000309157 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
RORA-202ENST00000309157 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
RORA-202ENST00000309157 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
RORA-202ENST00000309157 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
RORA-202ENST00000309157 CUX2O14529 1486 aa13.09□□□□□ -0.31
RORA-202ENST00000309157 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.32
RORA-202ENST00000309157 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
RORA-202ENST00000309157 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
RORA-202ENST00000309157 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
RORA-202ENST00000309157 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
RORA-202ENST00000309157 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
RORA-202ENST00000309157 PPARGC1BQ86YN6 1023 aaKnown RBP13□□□□□ -0.33
RORA-202ENST00000309157 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
RORA-202ENST00000309157 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
RORA-202ENST00000309157 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
RORA-202ENST00000309157 CFTRP13569 1480 aa12.9□□□□□ -0.34
RORA-202ENST00000309157 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
RORA-202ENST00000309157 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
RORA-202ENST00000309157 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
RORA-202ENST00000309157 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
RORA-202ENST00000309157 WDR62O43379 1518 aa12.87□□□□□ -0.35
RORA-202ENST00000309157 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
RORA-202ENST00000309157 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
RORA-202ENST00000309157 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
RORA-202ENST00000309157 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
RORA-202ENST00000309157 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
RORA-202ENST00000309157 SUPT5HO00267 1087 aaKnown RBP12.7□□□□□ -0.38
RORA-202ENST00000309157 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
RORA-202ENST00000309157 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
RORA-202ENST00000309157 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
RORA-202ENST00000309157 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
RORA-202ENST00000309157 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
RORA-202ENST00000309157 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
RORA-202ENST00000309157 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
RORA-202ENST00000309157 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
RORA-202ENST00000309157 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
RORA-202ENST00000309157 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.391e-6■□□□□ 10.6
RORA-202ENST00000309157 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
RORA-202ENST00000309157 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
RORA-202ENST00000309157 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
RORA-202ENST00000309157 POLA1P09884 1462 aaPredicted RBP12.57□□□□□ -0.4
RORA-202ENST00000309157 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
RORA-202ENST00000309157 ABCC8Q09428 1581 aa12.54□□□□□ -0.4
RORA-202ENST00000309157 CUX1P39880 1505 aa12.53□□□□□ -0.4
RORA-202ENST00000309157 TDRD9Q8NDG6 1382 aaKnown RBP12.52□□□□□ -0.4
RORA-202ENST00000309157 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
RORA-202ENST00000309157 SOGA1O94964 1423 aa12.5□□□□□ -0.41
RORA-202ENST00000309157 FBLN2P98095 1184 aa12.49□□□□□ -0.41
RORA-202ENST00000309157 CHD1O14646 1710 aa12.49□□□□□ -0.41
RORA-202ENST00000309157 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
RORA-202ENST00000309157 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
RORA-202ENST00000309157 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
RORA-202ENST00000309157 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
RORA-202ENST00000309157 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
RORA-202ENST00000309157 SNAPC4Q5SXM2 1469 aa12.41□□□□□ -0.42
RORA-202ENST00000309157 ARHGEF11O15085 1522 aa12.4□□□□□ -0.42
RORA-202ENST00000309157 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
RORA-202ENST00000309157 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
RORA-202ENST00000309157 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
RORA-202ENST00000309157 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
RORA-202ENST00000309157 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
RORA-202ENST00000309157 PBRM1Q86U86 1689 aa12.36□□□□□ -0.43
RORA-202ENST00000309157 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms