RNA–Protein interactions for RNA: ENST00000308347.10

SMG1P1-201, Transcript of SMG1 pseudogene 1, humanhuman

TSL 5

Gene SMG1P1, Length 1,058 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P1-201ENST00000308347 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
SMG1P1-201ENST00000308347 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
SMG1P1-201ENST00000308347 ABCC9O60706 1549 aa18.25■□□□□ 0.51
SMG1P1-201ENST00000308347 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
SMG1P1-201ENST00000308347 CCDC180Q9P1Z9 1646 aa17.7■□□□□ 0.42
SMG1P1-201ENST00000308347 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
SMG1P1-201ENST00000308347 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
SMG1P1-201ENST00000308347 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMG1P1-201ENST00000308347 NACADO15069 1562 aa16.87■□□□□ 0.29
SMG1P1-201ENST00000308347 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
SMG1P1-201ENST00000308347 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
SMG1P1-201ENST00000308347 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
SMG1P1-201ENST00000308347 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
SMG1P1-201ENST00000308347 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
SMG1P1-201ENST00000308347 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
SMG1P1-201ENST00000308347 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
SMG1P1-201ENST00000308347 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
SMG1P1-201ENST00000308347 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
SMG1P1-201ENST00000308347 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
SMG1P1-201ENST00000308347 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
SMG1P1-201ENST00000308347 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
SMG1P1-201ENST00000308347 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
SMG1P1-201ENST00000308347 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
SMG1P1-201ENST00000308347 CUX2O14529 1486 aa15.93■□□□□ 0.14
SMG1P1-201ENST00000308347 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
SMG1P1-201ENST00000308347 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
SMG1P1-201ENST00000308347 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
SMG1P1-201ENST00000308347 NESP48681 1621 aa15.53■□□□□ 0.08
SMG1P1-201ENST00000308347 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
SMG1P1-201ENST00000308347 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
SMG1P1-201ENST00000308347 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
SMG1P1-201ENST00000308347 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
SMG1P1-201ENST00000308347 FOXD1Q16676 465 aa15.35■□□□□ 0.05
SMG1P1-201ENST00000308347 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
SMG1P1-201ENST00000308347 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
SMG1P1-201ENST00000308347 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
SMG1P1-201ENST00000308347 KIF21AQ7Z4S6 1674 aa15.28■□□□□ 0.04
SMG1P1-201ENST00000308347 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
SMG1P1-201ENST00000308347 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
SMG1P1-201ENST00000308347 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
SMG1P1-201ENST00000308347 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
SMG1P1-201ENST00000308347 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
SMG1P1-201ENST00000308347 WDR62O43379 1518 aa15.12■□□□□ 0.01
SMG1P1-201ENST00000308347 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
SMG1P1-201ENST00000308347 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
SMG1P1-201ENST00000308347 POTEDQ86YR6 584 aa15.02■□□□□ -0
SMG1P1-201ENST00000308347 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
SMG1P1-201ENST00000308347 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
SMG1P1-201ENST00000308347 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
SMG1P1-201ENST00000308347 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
SMG1P1-201ENST00000308347 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
SMG1P1-201ENST00000308347 ARHGEF11O15085 1522 aa14.88□□□□□ -0.03
SMG1P1-201ENST00000308347 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
SMG1P1-201ENST00000308347 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
SMG1P1-201ENST00000308347 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
SMG1P1-201ENST00000308347 CFTRP13569 1480 aa14.82□□□□□ -0.04
SMG1P1-201ENST00000308347 WIZO95785 1651 aa14.81□□□□□ -0.04
SMG1P1-201ENST00000308347 ZNF608Q9ULD9 1512 aaPredicted RBP14.75□□□□□ -0.05
SMG1P1-201ENST00000308347 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
SMG1P1-201ENST00000308347 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
SMG1P1-201ENST00000308347 MSH5O43196 834 aa14.63□□□□□ -0.07
SMG1P1-201ENST00000308347 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
SMG1P1-201ENST00000308347 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
SMG1P1-201ENST00000308347 CHD1O14646 1710 aa14.6□□□□□ -0.07
SMG1P1-201ENST00000308347 FBLN2P98095 1184 aa14.59□□□□□ -0.07
SMG1P1-201ENST00000308347 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
SMG1P1-201ENST00000308347 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
SMG1P1-201ENST00000308347 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
SMG1P1-201ENST00000308347 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMG1P1-201ENST00000308347 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
SMG1P1-201ENST00000308347 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
SMG1P1-201ENST00000308347 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
SMG1P1-201ENST00000308347 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
SMG1P1-201ENST00000308347 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
SMG1P1-201ENST00000308347 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
SMG1P1-201ENST00000308347 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
SMG1P1-201ENST00000308347 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
SMG1P1-201ENST00000308347 SYNJ1O43426 1573 aa14.38□□□□□ -0.11
SMG1P1-201ENST00000308347 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
SMG1P1-201ENST00000308347 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
SMG1P1-201ENST00000308347 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
SMG1P1-201ENST00000308347 SOGA1O94964 1423 aa14.33□□□□□ -0.11
SMG1P1-201ENST00000308347 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
SMG1P1-201ENST00000308347 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
SMG1P1-201ENST00000308347 SYNJ2O15056 1496 aa14.28□□□□□ -0.12
SMG1P1-201ENST00000308347 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
SMG1P1-201ENST00000308347 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
SMG1P1-201ENST00000308347 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
SMG1P1-201ENST00000308347 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
SMG1P1-201ENST00000308347 PLPPR3Q6T4P5 718 aa14.21□□□□□ -0.13
SMG1P1-201ENST00000308347 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
SMG1P1-201ENST00000308347 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
SMG1P1-201ENST00000308347 CUX1P39880 1505 aa14.14□□□□□ -0.15
SMG1P1-201ENST00000308347 KIF13AQ9H1H9 1805 aa14.13□□□□□ -0.15
SMG1P1-201ENST00000308347 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
SMG1P1-201ENST00000308347 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
SMG1P1-201ENST00000308347 GRIN2AQ12879 1464 aa14.08□□□□□ -0.16
SMG1P1-201ENST00000308347 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
SMG1P1-201ENST00000308347 FAM69CQ0P6D2 419 aa14.05□□□□□ -0.16
SMG1P1-201ENST00000308347 NUP160Q12769 1436 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms