RNA–Protein interactions for RNA: ENST00000278590.7

ZC3H12C-201, Transcript of zinc finger CCCH-type containing 12C, humanhuman

TSL 2 BASIC

Gene ZC3H12C, Length 8,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12C-201ENST00000278590 NISCHQ9Y2I1 1504 aa11.38□□□□□ -0.59
ZC3H12C-201ENST00000278590 CCDC180Q9P1Z9 1646 aa9.96□□□□□ -0.82
ZC3H12C-201ENST00000278590 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
ZC3H12C-201ENST00000278590 ABCC9O60706 1549 aa9.82□□□□□ -0.84
ZC3H12C-201ENST00000278590 SHROOM4Q9ULL8 1493 aa9.7□□□□□ -0.86
ZC3H12C-201ENST00000278590 SUPT5HO00267 1087 aaKnown RBP9.59□□□□□ -0.87
ZC3H12C-201ENST00000278590 FAM9AQ8IZU1 332 aaPredicted RBP9.58□□□□□ -0.88
ZC3H12C-201ENST00000278590 ZCCHC6Q5VYS8 1495 aaKnown RBP9.56□□□□□ -0.88
ZC3H12C-201ENST00000278590 NACADO15069 1562 aa9.5□□□□□ -0.89
ZC3H12C-201ENST00000278590 RB1CC1Q8TDY2 1594 aa9.49□□□□□ -0.89
ZC3H12C-201ENST00000278590 MYO15BQ96JP2 1530 aa9.47□□□□□ -0.89
ZC3H12C-201ENST00000278590 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
ZC3H12C-201ENST00000278590 CHIC1Q5VXU3 224 aa9.28□□□□□ -0.92
ZC3H12C-201ENST00000278590 PABPN1Q86U42 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
ZC3H12C-201ENST00000278590 APLP2Q06481 763 aa9.2□□□□□ -0.94
ZC3H12C-201ENST00000278590 SCRIBQ14160 1630 aa9.13□□□□□ -0.95
ZC3H12C-201ENST00000278590 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
ZC3H12C-201ENST00000278590 PCGF6Q9BYE7 350 aa9.03□□□□□ -0.96
ZC3H12C-201ENST00000278590 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
ZC3H12C-201ENST00000278590 HRCP23327 699 aa9□□□□□ -0.97
ZC3H12C-201ENST00000278590 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
ZC3H12C-201ENST00000278590 TRIM41Q8WV44 630 aa8.96□□□□□ -0.97
ZC3H12C-201ENST00000278590 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
ZC3H12C-201ENST00000278590 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
ZC3H12C-201ENST00000278590 BAZ1AQ9NRL2 1556 aaPredicted RBP8.88□□□□□ -0.99
ZC3H12C-201ENST00000278590 CECR2Q9BXF3 1484 aa8.84□□□□□ -0.99
ZC3H12C-201ENST00000278590 EIF4G1Q04637 1599 aaKnown RBP8.84□□□□□ -0.99
ZC3H12C-201ENST00000278590 SMARCA2P51531 1590 aa8.82□□□□□ -1
ZC3H12C-201ENST00000278590 DNAJC5BQ9UF47 199 aa8.8□□□□□ -1
ZC3H12C-201ENST00000278590 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
ZC3H12C-201ENST00000278590 NCAPD3P42695 1498 aa8.79□□□□□ -1
ZC3H12C-201ENST00000278590 UNC13AQ9UPW8 1703 aa8.79□□□□□ -1
ZC3H12C-201ENST00000278590 BAZ1BQ9UIG0 1483 aaKnown RBP8.78□□□□□ -1
ZC3H12C-201ENST00000278590 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1
ZC3H12C-201ENST00000278590 WIZO95785 1651 aa8.77□□□□□ -1.01
ZC3H12C-201ENST00000278590 ZEB1P37275 1124 aaPredicted RBP8.77□□□□□ -1.01
ZC3H12C-201ENST00000278590 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
ZC3H12C-201ENST00000278590 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
ZC3H12C-201ENST00000278590 CC2D2AQ9P2K1 1620 aa8.73□□□□□ -1.01
ZC3H12C-201ENST00000278590 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
ZC3H12C-201ENST00000278590 CCER1Q8TC90 406 aaPredicted RBP8.68□□□□□ -1.02
ZC3H12C-201ENST00000278590 HMGXB3Q12766 1538 aa8.67□□□□□ -1.02
ZC3H12C-201ENST00000278590 PDS5BQ9NTI5 1447 aa8.64□□□□□ -1.03
ZC3H12C-201ENST00000278590 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
ZC3H12C-201ENST00000278590 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
ZC3H12C-201ENST00000278590 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
ZC3H12C-201ENST00000278590 TOP2AP11388 1531 aaKnown RBP8.62□□□□□ -1.03
ZC3H12C-201ENST00000278590 UBTFP17480 764 aaKnown RBP8.61□□□□□ -1.03
ZC3H12C-201ENST00000278590 ERCC6Q03468 1493 aa8.6□□□□□ -1.03
ZC3H12C-201ENST00000278590 CCDC88BA6NC98 1476 aa8.6□□□□□ -1.03
ZC3H12C-201ENST00000278590 MYT1LQ9UL68 1186 aa8.59□□□□□ -1.03
ZC3H12C-201ENST00000278590 CSRNP3Q8WYN3 585 aa8.56□□□□□ -1.04
ZC3H12C-201ENST00000278590 EEA1Q15075 1411 aa8.55□□□□□ -1.04
ZC3H12C-201ENST00000278590 ABCC8Q09428 1581 aa8.54□□□□□ -1.04
ZC3H12C-201ENST00000278590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.51□□□□□ -1.05
ZC3H12C-201ENST00000278590 HNRNPUL2Q1KMD3 747 aaKnown RBP8.51□□□□□ -1.05
ZC3H12C-201ENST00000278590 TNIKQ9UKE5 1360 aa8.5□□□□□ -1.05
ZC3H12C-201ENST00000278590 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
ZC3H12C-201ENST00000278590 SOGA1O94964 1423 aa8.48□□□□□ -1.05
ZC3H12C-201ENST00000278590 CEP162Q5TB80 1403 aa8.48□□□□□ -1.05
ZC3H12C-201ENST00000278590 CFTRP13569 1480 aa8.47□□□□□ -1.05
ZC3H12C-201ENST00000278590 TTBK1Q5TCY1 1321 aaPredicted RBP8.47□□□□□ -1.05
ZC3H12C-201ENST00000278590 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
ZC3H12C-201ENST00000278590 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
ZC3H12C-201ENST00000278590 CENPBP07199 599 aaPredicted RBP8.46□□□□□ -1.05
ZC3H12C-201ENST00000278590 FANCD2Q9BXW9 1451 aa8.45□□□□□ -1.06
ZC3H12C-201ENST00000278590 GOLGA3Q08378 1498 aa8.44□□□□□ -1.06
ZC3H12C-201ENST00000278590 NEFLP07196 543 aa8.44□□□□□ -1.06
ZC3H12C-201ENST00000278590 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
ZC3H12C-201ENST00000278590 RUSC2Q8N2Y8 1516 aa8.43□□□□□ -1.06
ZC3H12C-201ENST00000278590 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
ZC3H12C-201ENST00000278590 MRC2Q9UBG0 1479 aa8.4□□□□□ -1.07
ZC3H12C-201ENST00000278590 NESP48681 1621 aa8.39□□□□□ -1.07
ZC3H12C-201ENST00000278590 CUX2O14529 1486 aa8.37□□□□□ -1.07
ZC3H12C-201ENST00000278590 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
ZC3H12C-201ENST00000278590 CLIP1P30622 1438 aa8.35□□□□□ -1.07
ZC3H12C-201ENST00000278590 KIF21BO75037 1637 aa8.35□□□□□ -1.07
ZC3H12C-201ENST00000278590 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
ZC3H12C-201ENST00000278590 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
ZC3H12C-201ENST00000278590 IFT140Q96RY7 1462 aa8.3□□□□□ -1.08
ZC3H12C-201ENST00000278590 FBLN2P98095 1184 aa8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 ZNF316A6NFI3 1004 aaPredicted RBP8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 NPM1P06748 294 aaKnown RBP eCLIP8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 CDK11AQ9UQ88 783 aaPredicted RBP8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 RAPGEF2Q9Y4G8 1499 aa8.29□□□□□ -1.08
ZC3H12C-201ENST00000278590 TOP2BQ02880 1626 aa8.28□□□□□ -1.08
ZC3H12C-201ENST00000278590 TOPBP1Q92547 1522 aa8.27□□□□□ -1.09
ZC3H12C-201ENST00000278590 DAXXQ9UER7 740 aaPredicted RBP8.26□□□□□ -1.09
ZC3H12C-201ENST00000278590 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
ZC3H12C-201ENST00000278590 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
ZC3H12C-201ENST00000278590 BIVM-ERCC5R4GMW8 1640 aa8.25□□□□□ -1.09
ZC3H12C-201ENST00000278590 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
ZC3H12C-201ENST00000278590 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
ZC3H12C-201ENST00000278590 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
ZC3H12C-201ENST00000278590 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
ZC3H12C-201ENST00000278590 URB2Q14146 1524 aaKnown RBP8.22□□□□□ -1.09
ZC3H12C-201ENST00000278590 ERICH3Q5RHP9 1530 aa8.22□□□□□ -1.09
ZC3H12C-201ENST00000278590 NEFMP07197 916 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms