RNA–Protein interactions for RNA: ENST00000258382.9

SP110-202, Transcript of SP110 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP110, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-202ENST00000258382 NISCHQ9Y2I1 1504 aa12.85□□□□□ -0.35
SP110-202ENST00000258382 ABCC9O60706 1549 aa12.01□□□□□ -0.49
SP110-202ENST00000258382 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
SP110-202ENST00000258382 CHIC1Q5VXU3 224 aa11.69□□□□□ -0.54
SP110-202ENST00000258382 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
SP110-202ENST00000258382 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.58
SP110-202ENST00000258382 AEBP2Q6ZN18 517 aaPredicted RBP11.37□□□□□ -0.59
SP110-202ENST00000258382 NACADO15069 1562 aa11.31□□□□□ -0.6
SP110-202ENST00000258382 UNC13AQ9UPW8 1703 aa11.19□□□□□ -0.62
SP110-202ENST00000258382 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
SP110-202ENST00000258382 MYO15BQ96JP2 1530 aa11.12□□□□□ -0.63
SP110-202ENST00000258382 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
SP110-202ENST00000258382 DNAJC5Q9H3Z4 198 aa11.11□□□□□ -0.63
SP110-202ENST00000258382 CC2D2AQ9P2K1 1620 aa10.96□□□□□ -0.66
SP110-202ENST00000258382 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.66
SP110-202ENST00000258382 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
SP110-202ENST00000258382 EIF4G1Q04637 1599 aaKnown RBP10.85□□□□□ -0.67
SP110-202ENST00000258382 CUX2O14529 1486 aa10.79□□□□□ -0.68
SP110-202ENST00000258382 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
SP110-202ENST00000258382 ZCCHC6Q5VYS8 1495 aaKnown RBP10.6□□□□□ -0.71
SP110-202ENST00000258382 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
SP110-202ENST00000258382 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SP110-202ENST00000258382 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.73
SP110-202ENST00000258382 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
SP110-202ENST00000258382 THOC2Q8NI27 1593 aaKnown RBP10.4□□□□□ -0.75
SP110-202ENST00000258382 NCAPD3P42695 1498 aa10.38□□□□□ -0.75
SP110-202ENST00000258382 HMGXB3Q12766 1538 aa10.35□□□□□ -0.75
SP110-202ENST00000258382 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.77
SP110-202ENST00000258382 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
SP110-202ENST00000258382 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
SP110-202ENST00000258382 TRIM41Q8WV44 630 aa10.19□□□□□ -0.78
SP110-202ENST00000258382 NESP48681 1621 aa10.18□□□□□ -0.78
SP110-202ENST00000258382 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
SP110-202ENST00000258382 PEG3Q9GZU2 1588 aa10.17□□□□□ -0.78
SP110-202ENST00000258382 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
SP110-202ENST00000258382 WDR62O43379 1518 aa10.15□□□□□ -0.78
SP110-202ENST00000258382 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
SP110-202ENST00000258382 PDS5BQ9NTI5 1447 aa10.13□□□□□ -0.79
SP110-202ENST00000258382 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
SP110-202ENST00000258382 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
SP110-202ENST00000258382 RIMBP3CA6NJZ7 1639 aa10.03□□□□□ -0.8
SP110-202ENST00000258382 RIMBP3BA6NNM3 1639 aa10.03□□□□□ -0.8
SP110-202ENST00000258382 RIMBP3Q9UFD9 1639 aa10.03□□□□□ -0.8
SP110-202ENST00000258382 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
SP110-202ENST00000258382 CADPSQ9ULU8 1353 aa9.96□□□□□ -0.82
SP110-202ENST00000258382 ARHGEF11O15085 1522 aa9.94□□□□□ -0.82
SP110-202ENST00000258382 CEP164Q9UPV0 1460 aa9.93□□□□□ -0.82
SP110-202ENST00000258382 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
SP110-202ENST00000258382 PRDM2Q13029 1718 aa9.83□□□□□ -0.84
SP110-202ENST00000258382 RSF1Q96T23 1441 aaPredicted RBP9.82□□□□□ -0.84
SP110-202ENST00000258382 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
SP110-202ENST00000258382 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
SP110-202ENST00000258382 CFTRP13569 1480 aa9.8□□□□□ -0.84
SP110-202ENST00000258382 ARAP1Q96P48 1450 aa9.8□□□□□ -0.84
SP110-202ENST00000258382 IFT140Q96RY7 1462 aa9.79□□□□□ -0.84
SP110-202ENST00000258382 PLPPR3Q6T4P5 718 aa9.77□□□□□ -0.85
SP110-202ENST00000258382 CHD1O14646 1710 aa9.74□□□□□ -0.85
SP110-202ENST00000258382 EIF4G3O43432 1585 aaKnown RBP9.73□□□□□ -0.85
SP110-202ENST00000258382 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
SP110-202ENST00000258382 EHMT2Q96KQ7 1210 aa9.69□□□□□ -0.86
SP110-202ENST00000258382 CLASP1Q7Z460 1538 aa9.69□□□□□ -0.86
SP110-202ENST00000258382 ZNF608Q9ULD9 1512 aaPredicted RBP9.68□□□□□ -0.86
SP110-202ENST00000258382 ABCC8Q09428 1581 aa9.68□□□□□ -0.86
SP110-202ENST00000258382 WIZO95785 1651 aa9.66□□□□□ -0.86
SP110-202ENST00000258382 TRHP20396 242 aaPredicted RBP9.65□□□□□ -0.87
SP110-202ENST00000258382 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
SP110-202ENST00000258382 CYB5RLQ6IPT4 315 aa9.64□□□□□ -0.87
SP110-202ENST00000258382 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
SP110-202ENST00000258382 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
SP110-202ENST00000258382 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
SP110-202ENST00000258382 SYNJ1O43426 1573 aa9.6□□□□□ -0.87
SP110-202ENST00000258382 MAGI1Q96QZ7 1491 aaPredicted RBP9.54□□□□□ -0.88
SP110-202ENST00000258382 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.89
SP110-202ENST00000258382 GAPVD1Q14C86 1478 aa9.49□□□□□ -0.89
SP110-202ENST00000258382 KIF13AQ9H1H9 1805 aa9.49□□□□□ -0.89
SP110-202ENST00000258382 POLA1P09884 1462 aaPredicted RBP9.49□□□□□ -0.89
SP110-202ENST00000258382 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
SP110-202ENST00000258382 SYNJ2O15056 1496 aa9.47□□□□□ -0.89
SP110-202ENST00000258382 SNAPC4Q5SXM2 1469 aa9.47□□□□□ -0.89
SP110-202ENST00000258382 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
SP110-202ENST00000258382 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
SP110-202ENST00000258382 KCNA4P22459 653 aa9.43□□□□□ -0.9
SP110-202ENST00000258382 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
SP110-202ENST00000258382 PBRM1Q86U86 1689 aa9.42□□□□□ -0.9
SP110-202ENST00000258382 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
SP110-202ENST00000258382 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.9
SP110-202ENST00000258382 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
SP110-202ENST00000258382 SOGA1O94964 1423 aa9.37□□□□□ -0.91
SP110-202ENST00000258382 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
SP110-202ENST00000258382 CEP170Q5SW79 1584 aa9.36□□□□□ -0.91
SP110-202ENST00000258382 RAD54L2Q9Y4B4 1467 aa9.35□□□□□ -0.91
SP110-202ENST00000258382 NUP160Q12769 1436 aa9.35□□□□□ -0.91
SP110-202ENST00000258382 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
SP110-202ENST00000258382 DIP2BQ9P265 1576 aa9.34□□□□□ -0.91
SP110-202ENST00000258382 FBLN2P98095 1184 aa9.34□□□□□ -0.91
SP110-202ENST00000258382 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
SP110-202ENST00000258382 KDM6BO15054 1643 aa9.33□□□□□ -0.92
SP110-202ENST00000258382 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
SP110-202ENST00000258382 TDRD9Q8NDG6 1382 aaKnown RBP9.32□□□□□ -0.92
SP110-202ENST00000258382 ADAMTS12P58397 1594 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms