RNA–Protein interactions for RNA: ENST00000225512.5

WNT3-201, Transcript of Wnt family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WNT3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3-201ENST00000225512 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
WNT3-201ENST00000225512 ABCC9O60706 1549 aa19.21■□□□□ 0.67
WNT3-201ENST00000225512 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
WNT3-201ENST00000225512 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
WNT3-201ENST00000225512 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
WNT3-201ENST00000225512 CCDC180Q9P1Z9 1646 aa18.07■□□□□ 0.48
WNT3-201ENST00000225512 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
WNT3-201ENST00000225512 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
WNT3-201ENST00000225512 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
WNT3-201ENST00000225512 NACADO15069 1562 aa17.39■□□□□ 0.37
WNT3-201ENST00000225512 PPARGC1BQ86YN6 1023 aaKnown RBP17.39■□□□□ 0.37
WNT3-201ENST00000225512 HRCP23327 699 aa17.36■□□□□ 0.37
WNT3-201ENST00000225512 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
WNT3-201ENST00000225512 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
WNT3-201ENST00000225512 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
WNT3-201ENST00000225512 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
WNT3-201ENST00000225512 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
WNT3-201ENST00000225512 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
WNT3-201ENST00000225512 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
WNT3-201ENST00000225512 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
WNT3-201ENST00000225512 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
WNT3-201ENST00000225512 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
WNT3-201ENST00000225512 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
WNT3-201ENST00000225512 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
WNT3-201ENST00000225512 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
WNT3-201ENST00000225512 CHIC1Q5VXU3 224 aa16.68■□□□□ 0.26
WNT3-201ENST00000225512 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
WNT3-201ENST00000225512 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
WNT3-201ENST00000225512 MYT1Q01538 1121 aa16.47■□□□□ 0.23
WNT3-201ENST00000225512 NESP48681 1621 aa16.36■□□□□ 0.21
WNT3-201ENST00000225512 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
WNT3-201ENST00000225512 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
WNT3-201ENST00000225512 GTF3C3Q9Y5Q9 886 aa16.25■□□□□ 0.19
WNT3-201ENST00000225512 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
WNT3-201ENST00000225512 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
WNT3-201ENST00000225512 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
WNT3-201ENST00000225512 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
WNT3-201ENST00000225512 SMARCA2P51531 1590 aa16.18■□□□□ 0.18
WNT3-201ENST00000225512 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
WNT3-201ENST00000225512 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
WNT3-201ENST00000225512 FBLN2P98095 1184 aa16.09■□□□□ 0.17
WNT3-201ENST00000225512 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
WNT3-201ENST00000225512 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
WNT3-201ENST00000225512 CUX2O14529 1486 aa16.04■□□□□ 0.16
WNT3-201ENST00000225512 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
WNT3-201ENST00000225512 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
WNT3-201ENST00000225512 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
WNT3-201ENST00000225512 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
WNT3-201ENST00000225512 WIZO95785 1651 aa16■□□□□ 0.15
WNT3-201ENST00000225512 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
WNT3-201ENST00000225512 CENPBP07199 599 aaPredicted RBP15.97■□□□□ 0.15
WNT3-201ENST00000225512 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
WNT3-201ENST00000225512 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
WNT3-201ENST00000225512 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
WNT3-201ENST00000225512 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
WNT3-201ENST00000225512 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
WNT3-201ENST00000225512 HMGXB3Q12766 1538 aa15.86■□□□□ 0.13
WNT3-201ENST00000225512 DIEXFQ68CQ4 756 aaKnown RBP15.81■□□□□ 0.12
WNT3-201ENST00000225512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
WNT3-201ENST00000225512 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
WNT3-201ENST00000225512 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.12
WNT3-201ENST00000225512 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
WNT3-201ENST00000225512 MRC2Q9UBG0 1479 aa15.75■□□□□ 0.11
WNT3-201ENST00000225512 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
WNT3-201ENST00000225512 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
WNT3-201ENST00000225512 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
WNT3-201ENST00000225512 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
WNT3-201ENST00000225512 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
WNT3-201ENST00000225512 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
WNT3-201ENST00000225512 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
WNT3-201ENST00000225512 ABCC8Q09428 1581 aa15.64■□□□□ 0.09
WNT3-201ENST00000225512 CHMP7Q8WUX9 453 aaPredicted RBP15.61■□□□□ 0.09
WNT3-201ENST00000225512 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
WNT3-201ENST00000225512 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
WNT3-201ENST00000225512 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
WNT3-201ENST00000225512 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
WNT3-201ENST00000225512 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
WNT3-201ENST00000225512 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
WNT3-201ENST00000225512 CFTRP13569 1480 aa15.52■□□□□ 0.08
WNT3-201ENST00000225512 SOGA1O94964 1423 aa15.46■□□□□ 0.07
WNT3-201ENST00000225512 WDR62O43379 1518 aa15.46■□□□□ 0.07
WNT3-201ENST00000225512 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
WNT3-201ENST00000225512 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
WNT3-201ENST00000225512 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
WNT3-201ENST00000225512 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
WNT3-201ENST00000225512 MIER1Q8N108 512 aa15.39■□□□□ 0.05
WNT3-201ENST00000225512 PRKCSHP14314 528 aaPredicted RBP15.36■□□□□ 0.05
WNT3-201ENST00000225512 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
WNT3-201ENST00000225512 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
WNT3-201ENST00000225512 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
WNT3-201ENST00000225512 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
WNT3-201ENST00000225512 ZNF316A6NFI3 1004 aaPredicted RBP15.28■□□□□ 0.04
WNT3-201ENST00000225512 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
WNT3-201ENST00000225512 BCANQ96GW7 911 aa15.27■□□□□ 0.04
WNT3-201ENST00000225512 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
WNT3-201ENST00000225512 TSHZ2Q9NRE2 1034 aa15.25■□□□□ 0.03
WNT3-201ENST00000225512 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
WNT3-201ENST00000225512 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
WNT3-201ENST00000225512 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
WNT3-201ENST00000225512 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms