RNA–Protein interactions for RNA: ENSMUST00000119503.1

Hmgb1-ps6-201, mousemouse

BASIC

Gene Hmgb1-ps6, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps6-201ENSMUST00000119503 Mapk8ip2Q9ERE9 830 aa14.07□□□□□ -0.16
Hmgb1-ps6-201ENSMUST00000119503 Chic1Q8CBW7 227 aa13.76□□□□□ -0.21
Hmgb1-ps6-201ENSMUST00000119503 Phf23Q8BSN5 401 aa12.23□□□□□ -0.45
Hmgb1-ps6-201ENSMUST00000119503 Plppr3Q7TPB0 716 aa12.07□□□□□ -0.48
Hmgb1-ps6-201ENSMUST00000119503 Gab3Q8BSM5 595 aa11.73□□□□□ -0.53
Hmgb1-ps6-201ENSMUST00000119503 Kcna4Q61423 654 aa11.36□□□□□ -0.59
Hmgb1-ps6-201ENSMUST00000119503 Senp3Q9EP97 568 aaKnown RBP11.25□□□□□ -0.61
Hmgb1-ps6-201ENSMUST00000119503 Fam163aQ8CAA5 168 aa10.69□□□□□ -0.7
Hmgb1-ps6-201ENSMUST00000119503 Ube2uB1AUC4 352 aa10.4□□□□□ -0.74
Hmgb1-ps6-201ENSMUST00000119503 Ppargc1bQ8VHJ7 1014 aa10.4□□□□□ -0.74
Hmgb1-ps6-201ENSMUST00000119503 Dmrt2Q8BG36 561 aa10.2□□□□□ -0.78
Hmgb1-ps6-201ENSMUST00000119503 Slc4a1apE9PX68 744 aa10.08□□□□□ -0.8
Hmgb1-ps6-201ENSMUST00000119503 Trap1aP19473 224 aa9.97□□□□□ -0.81
Hmgb1-ps6-201ENSMUST00000119503 Hoxd11P23813 323 aa9.94□□□□□ -0.82
Hmgb1-ps6-201ENSMUST00000119503 ArsiQ32KI9 573 aa9.76□□□□□ -0.85
Hmgb1-ps6-201ENSMUST00000119503 GapdhsQ64467 440 aa9.7□□□□□ -0.86
Hmgb1-ps6-201ENSMUST00000119503 Znf219Q6IQX8 726 aa9.69□□□□□ -0.86
Hmgb1-ps6-201ENSMUST00000119503 Fam71e1A1L3C1 212 aa9.67□□□□□ -0.86
Hmgb1-ps6-201ENSMUST00000119503 Dnajc5bQ9CQ94 199 aa9.52□□□□□ -0.89
Hmgb1-ps6-201ENSMUST00000119503 Slc34a2Q9DBP0 697 aa9.5□□□□□ -0.89
Hmgb1-ps6-201ENSMUST00000119503 Atf5O70191 283 aa9.45□□□□□ -0.9
Hmgb1-ps6-201ENSMUST00000119503 Ppp4r2Q0VGB7 417 aa9.44□□□□□ -0.9
Hmgb1-ps6-201ENSMUST00000119503 Hs6st3Q9QYK4 470 aa9.42□□□□□ -0.9
Hmgb1-ps6-201ENSMUST00000119503 Ehmt2Q9Z148 1263 aaKnown RBP9.39□□□□□ -0.91
Hmgb1-ps6-201ENSMUST00000119503 1700123L14RikQ3V2K7 440 aa9.38□□□□□ -0.91
Hmgb1-ps6-201ENSMUST00000119503 Chrna2Q91X60 512 aa9.37□□□□□ -0.91
Hmgb1-ps6-201ENSMUST00000119503 Nlrp6Q91WS2 869 aa9.34□□□□□ -0.91
Hmgb1-ps6-201ENSMUST00000119503 AcrbpQ3V140 540 aa9.33□□□□□ -0.92
Hmgb1-ps6-201ENSMUST00000119503 Pde4cQ3UEI1 686 aa9.26□□□□□ -0.93
Hmgb1-ps6-201ENSMUST00000119503 Rsph4aQ8BYM7 716 aa9.25□□□□□ -0.93
Hmgb1-ps6-201ENSMUST00000119503 Rtn4Q99P72 1162 aaKnown RBP9.22□□□□□ -0.93
Hmgb1-ps6-201ENSMUST00000119503 Cdca7Q9D0M2 382 aa9.22□□□□□ -0.93
Hmgb1-ps6-201ENSMUST00000119503 Akt1s1Q9D1F4 257 aa9.19□□□□□ -0.94
Hmgb1-ps6-201ENSMUST00000119503 Rimbp2Q80U40 1072 aa9.14□□□□□ -0.95
Hmgb1-ps6-201ENSMUST00000119503 Prm3Q62100 101 aa9.09□□□□□ -0.95
Hmgb1-ps6-201ENSMUST00000119503 Tshz2Q68FE9 1030 aa9.01□□□□□ -0.97
Hmgb1-ps6-201ENSMUST00000119503 Npm2Q80W85 207 aa8.96□□□□□ -0.98
Hmgb1-ps6-201ENSMUST00000119503 C1qtnf12Q8R2Z0 308 aa8.89□□□□□ -0.99
Hmgb1-ps6-201ENSMUST00000119503 Ecm2Q5FW85 670 aa8.87□□□□□ -0.99
Hmgb1-ps6-201ENSMUST00000119503 MyclP10166 368 aa8.86□□□□□ -0.99
Hmgb1-ps6-201ENSMUST00000119503 Prdm10Q3UTQ7 1184 aa8.85□□□□□ -0.99
Hmgb1-ps6-201ENSMUST00000119503 Riok3Q9DBU3 519 aaKnown RBP8.85□□□□□ -0.99
Hmgb1-ps6-201ENSMUST00000119503 Bach1P97302 739 aa8.82□□□□□ -1
Hmgb1-ps6-201ENSMUST00000119503 Styxl1Q9DAR2 321 aa8.82□□□□□ -1
Hmgb1-ps6-201ENSMUST00000119503 WdpcpQ8C456 722 aa8.73□□□□□ -1.01
Hmgb1-ps6-201ENSMUST00000119503 Znf704Q9ERQ3 566 aa8.73□□□□□ -1.01
Hmgb1-ps6-201ENSMUST00000119503 Slc4a5E9Q3M5 1116 aa8.72□□□□□ -1.01
Hmgb1-ps6-201ENSMUST00000119503 Sox12Q04890 314 aa8.72□□□□□ -1.01
Hmgb1-ps6-201ENSMUST00000119503 Trim41Q5NCC3 630 aa8.68□□□□□ -1.02
Hmgb1-ps6-201ENSMUST00000119503 CatipB9EKE5 520 aa8.62□□□□□ -1.03
Hmgb1-ps6-201ENSMUST00000119503 Ms4a5Q810P8 197 aa8.5□□□□□ -1.05
Hmgb1-ps6-201ENSMUST00000119503 Taok2Q6ZQ29 1240 aa8.46□□□□□ -1.06
Hmgb1-ps6-201ENSMUST00000119503 Tcf3P15806 651 aa8.45□□□□□ -1.06
Hmgb1-ps6-201ENSMUST00000119503 Prdm16A2A935 1275 aa8.4□□□□□ -1.06
Hmgb1-ps6-201ENSMUST00000119503 Arid3aQ62431 601 aa8.37□□□□□ -1.07
Hmgb1-ps6-201ENSMUST00000119503 Cacnb1Q8R3Z5 597 aa8.36□□□□□ -1.07
Hmgb1-ps6-201ENSMUST00000119503 Ifnlr1Q8CGK5 535 aa8.35□□□□□ -1.07
Hmgb1-ps6-201ENSMUST00000119503 G430095P16RikE9Q913 147 aa8.34□□□□□ -1.07
Hmgb1-ps6-201ENSMUST00000119503 MpndQ3TV65 487 aa8.23□□□□□ -1.09
Hmgb1-ps6-201ENSMUST00000119503 Zbtb12Q9Z150 459 aa8.23□□□□□ -1.09
Hmgb1-ps6-201ENSMUST00000119503 Znf703P0CL69 594 aa8.21□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Ildr2B5TVM2 661 aa8.19□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Grwd1Q810D6 446 aaKnown RBP8.19□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Fbln2P37889 1221 aa8.18□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Ppp1r37Q8BKR5 712 aa8.18□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Egfem1Q8C088 590 aa8.18□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Npm3Q9CPP0 175 aaKnown RBP8.15□□□□□ -1.1
Hmgb1-ps6-201ENSMUST00000119503 Zbtb7aO88939 569 aaKnown RBP8.12□□□□□ -1.11
Hmgb1-ps6-201ENSMUST00000119503 Spock2Q9ER58 423 aa8.1□□□□□ -1.11
Hmgb1-ps6-201ENSMUST00000119503 Ppp6r1Q7TSI3 856 aa8.09□□□□□ -1.11
Hmgb1-ps6-201ENSMUST00000119503 Rnf216P58283 853 aa8.08□□□□□ -1.12
Hmgb1-ps6-201ENSMUST00000119503 Skida1Q80YR3 822 aa8.08□□□□□ -1.12
Hmgb1-ps6-201ENSMUST00000119503 Gtpbp6Q3U6U5 514 aa8.07□□□□□ -1.12
Hmgb1-ps6-201ENSMUST00000119503 Skap1Q3UUV5 355 aa8.05□□□□□ -1.12
Hmgb1-ps6-201ENSMUST00000119503 Slc24a1Q91WD8 1130 aa8.04□□□□□ -1.12
Hmgb1-ps6-201ENSMUST00000119503 Prr29B1ARI9 187 aa8.02□□□□□ -1.13
Hmgb1-ps6-201ENSMUST00000119503 Kcnn1Q9EQR3 537 aa8.02□□□□□ -1.13
Hmgb1-ps6-201ENSMUST00000119503 Vsig10D3YX43 558 aa8□□□□□ -1.13
Hmgb1-ps6-201ENSMUST00000119503 MycnP03966 462 aaKnown RBP7.97□□□□□ -1.13
Hmgb1-ps6-201ENSMUST00000119503 Zbtb22Q9Z0G7 638 aa7.96□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Abcb7Q61102 752 aaKnown RBP7.95□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Lrrc43Q3V0L5 667 aa7.94□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Esf1Q3V1V3 845 aaKnown RBP7.94□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Zeb1Q64318 1117 aa7.94□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Slc4a2P13808 1237 aaKnown RBP7.91□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Ferd3lQ923Z4 168 aa7.91□□□□□ -1.14
Hmgb1-ps6-201ENSMUST00000119503 Mkrn3Q60764 544 aa7.88□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 Nkx1-1G3UXB3 402 aa7.86□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 P3h3Q8CG70 732 aa7.85□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 TimelessQ9R1X4 1197 aa7.85□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 Ubap1lG3UW59 384 aa7.84□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 Jarid2Q62315 1234 aa7.84□□□□□ -1.15
Hmgb1-ps6-201ENSMUST00000119503 Spryd3E9Q9B3 442 aa7.82□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Rsph6aQ8CDR2 708 aa7.82□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Hdac5Q9Z2V6 1113 aa7.81□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Clcn6O35454 870 aa7.78□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Dnajc5P60904 198 aa7.78□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Noa1Q9JJG9 693 aaKnown RBP7.78□□□□□ -1.16
Hmgb1-ps6-201ENSMUST00000119503 Fam117bQ3U3E2 584 aa7.77□□□□□ -1.17
Hmgb1-ps6-201ENSMUST00000119503 Hnrnpul2Q00PI9 745 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms