RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ABRQ12979 859 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 CUL1Q13616 776 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 GRB7Q14451 532 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 KYNUQ16719 465 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 ACSBG2Q5FVE4 666 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 GALNT7Q86SF2 657 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 VASH2Q86V25 355 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 TAX1BP1Q86VP1 789 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 D2HGDHQ8N465 521 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 LINC01555Q8NAE3 123 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 CD200R1Q8TD46 325 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 FOPNLQ96NB1 174 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 NDNQ99608 321 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 GPR21Q99679 349 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 AARSD1Q9BTE6 412 aaKnown RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 RAB11FIP5Q9BXF6 653 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 CPNE5Q9HCH3 593 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 LATS2Q9NRM7 1088 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 TMEM184BQ9Y519 407 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 ANKRD12Q6UB98 2062 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 SLC9B1P1A6NJY1 282 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RASGRF2O14827 1237 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 VPS26AO75436 327 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 C1orf105O95561 183 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 DLGAP3O95886 979 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FGF5P12034 268 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PVRP15151 417 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FOLR1P15328 257 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 GABRB3P28472 473 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 CCNFP41002 786 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 CARSP49589 748 aaKnown RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 ACY1Q03154 408 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 SRSF6Q13247 344 aaKnown RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FRG1Q14331 258 aaKnown RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 IL11RAQ14626 422 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 KLHL38Q2WGJ6 581 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 CCSMST1Q4G0I0 132 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 MANEAQ5SRI9 462 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 TRIM73Q86UV7 250 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PPP1R3BQ86XI6 285 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RASGRP3Q8IV61 690 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FLVCR1-AS1Q8TAF5 88 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RAD51AP1Q96B01 352 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RNF31Q96EP0 1072 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 IL17FQ96PD4 163 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 CCNL2Q96S94 520 aaPredicted RBP12.48□□□□□ -0.41
COL5A1-206ENST00000465877 ULBP3Q9BZM4 244 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PHACTR1Q9C0D0 580 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PRORYQ9H606 182 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FANCEQ9HB96 536 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 FGF21Q9NSA1 209 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 SPHK1Q9NYA1 384 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 ZFATQ9P243 1243 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PILRAQ9UKJ1 303 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 RARRES3Q9UL19 164 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 PCM1Q15154 2024 aa12.48□□□□□ -0.41
COL5A1-206ENST00000465877 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 A0A0J9YY10 115 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 EIF3HO15372 352 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 PSIP1O75475 530 aaKnown RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TIAF1O95411 115 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 MATN4O95460 622 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TUBB4AP04350 444 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 ENO3P13929 434 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 ZNF28P17035 718 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CD9P21926 228 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 PLTPP55058 493 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TUBB4BP68371 445 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CBLBQ13191 982 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TUBB2AQ13885 445 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 KIR2DS3Q14952 304 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 GPR19Q15760 415 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TMTC4Q5T4D3 741 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TEDDM1Q5T9Z0 273 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TTC23LQ6PF05 361 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CAPN12Q6ZSI9 719 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 NEK10Q6ZWH5 1172 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CPNE9Q8IYJ1 553 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 CACNA2D3Q8IZS8 1091 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 NLGN4XQ8N0W4 816 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 RAB42Q8N4Z0 105 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 IL22RA1Q8N6P7 574 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 C19orf47Q8N9M1 422 aaKnown RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 NLGN4YQ8NFZ3 816 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 OR2L8Q8NGY9 312 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 FBXO25Q8TCJ0 367 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 NKD1Q969G9 470 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 ZNF501Q96CX3 271 aaPredicted RBP12.47□□□□□ -0.41
COL5A1-206ENST00000465877 TRAPPC9Q96Q05 1148 aa12.47□□□□□ -0.41
COL5A1-206ENST00000465877 OR2A14Q96R47 310 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms