RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 IQCKQ8N0W5 287 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 OR9A1PQ8NGU1 263 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 DENND1AQ8TEH3 1009 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 NXNL1Q96CM4 212 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 ZMYND15Q9H091 742 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 HRASLS2Q9NWW9 162 aa29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.67■■■□□ 2.34
CSNK1E-206ENST00000413574 A0A087X1B8 175 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 A0A1W2PPM1 405 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 MYO1CO00159 1063 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 CDH16O75309 829 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 CPNE6O95741 557 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 POLR2CP19387 275 aaPredicted RBP29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 CAPZBP47756 277 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 ZNF574Q6ZN55 896 aaPredicted RBP29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 TIFABQ6ZNK6 161 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 PLD6Q8N2A8 252 aaKnown RBP29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 PTERQ96BW5 349 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 PARVBQ9HBI1 364 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 UTP6Q9NYH9 597 aaKnown RBP29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 SPTBN2O15020 2390 aa29.66■■■□□ 2.34
CSNK1E-206ENST00000413574 SLC16A5O15375 505 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 CYP2A7P20853 494 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 PKLRP30613 574 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 RAB28P51157 221 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 GFERP55789 205 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 SP140Q13342 867 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 HES3Q5TGS1 186 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 ADGRF3Q8IZF5 1079 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 LINC01555Q8NAE3 123 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 FBXO15Q8NCQ5 510 aaPredicted RBP29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 ZIM3Q96PE6 472 aa29.65■■■□□ 2.34
CSNK1E-206ENST00000413574 OR5K3A6NET4 321 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 D6RAR5 112 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 GOLGA8RI6L899 631 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 MPOP05164 745 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 LTA4HP09960 611 aaKnown RBP29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 SHMT2P34897 504 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 ZNF844Q08AG5 666 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 RASA2Q15283 850 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 OR4D1Q15615 310 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 N4BP2L1Q5TBK1 243 aaPredicted RBP29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 TAX1BP1Q86VP1 789 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 MCOLN3Q8TDD5 553 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 ANKRD7Q92527 254 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 ROPN1BQ9BZX4 212 aaPredicted RBP29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 EPB41L1Q9H4G0 881 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 ROPN1Q9HAT0 212 aaPredicted RBP29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 ZNF358Q9NW07 568 aa29.64■■■□□ 2.34
CSNK1E-206ENST00000413574 CDK4P11802 303 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 ATP6V0D1P61421 351 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SQSTM1Q13501 440 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 PPP1R3AQ16821 1122 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 CDCP2Q5VXM1 449 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 OOSP2Q86WS3 158 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 ADAMTS14Q8WXS8 1223 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SEMA6CQ9H3T2 930 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 PCMTD2Q9NV79 361 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SPHK1Q9NYA1 384 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 KLHL3Q9UH77 587 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 CAPN5O15484 640 aaPredicted RBP29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 KDM1AO60341 852 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SLC16A8O95907 504 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 H2AFXP16104 143 aaPredicted RBP29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 KRT15P19012 456 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SLC26A3P40879 764 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 GLRBP48167 497 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 PDX1P52945 283 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 FASTKQ14296 549 aaKnown RBP29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 IRGCQ6NXR0 463 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 B3GNT8Q7Z7M8 397 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 MARCH9Q86YJ5 346 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 CHCHD4Q8N4Q1 142 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 WDR48Q8TAF3 677 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 TGM7Q96PF1 710 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 ALG9Q9H6U8 611 aa29.63■■■□□ 2.33
CSNK1E-206ENST00000413574 SNRNP200O75643 2136 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 GSAPA4D1B5 854 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 GUCA1CO95843 209 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 TFEBP19484 476 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 KCNC1P48547 511 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 KLHL35Q6PF15 583 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 FBXO38Q6PIJ6 1188 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 WDR74Q6RFH5 385 aaPredicted RBP29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 RBM44Q6ZP01 1051 aaKnown RBP29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 CCDC91Q7Z6B0 441 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 ISCA2Q86U28 154 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 PPFIBP2Q8ND30 876 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 GPR78Q96P69 363 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 TMEM109Q9BVC6 243 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 NMRAL1Q9HBL8 299 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 OR6C2Q9NZP2 312 aa29.62■■■□□ 2.33
CSNK1E-206ENST00000413574 WDFY3Q8IZQ1 3526 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 FAM221BA6H8Z2 402 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 KLHL2O95198 593 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 MT-CO3P00414 261 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 MT-ND3P03897 115 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 CHRM5P08912 532 aaPredicted RBP29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 PYGBP11216 843 aa29.61■■■□□ 2.33
CSNK1E-206ENST00000413574 PCM1Q15154 2024 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms