RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	REEP1	Q9H902	201 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MARCH7	Q9H992	704 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CRTAC1	Q9NQ79	661 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PTTG3P	Q9NZH4	202 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	COX16	Q9P0S2	106 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	OPTC	Q9UBM4	332 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SPAST	Q9UBP0	616 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PSORS1C1	Q9UIG5	152 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	KLHL21	Q9UJP4	597 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ITM2B	Q9Y287	266 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC45A1	Q9Y2W3	748 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PCDHB14	Q9Y5E9	798 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PCDHGB6	Q9Y5F9	930 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DGKB	Q9Y6T7	804 aa		11.51	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DRGX	A6NNA5	263 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CLCA1	A8K7I4	914 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236		I6L893	689 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CACNB4	O00305	520 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	B4GAT1	O43505	415 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TMCC2	O75069	709 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLITRK5	O94991	958 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FABP3	P05413	133 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CDK1	P06493	297 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GJB1	P08034	283 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	USP17L7	P0C7H9	530 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ENDOU	P21128	410 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FUT4	P22083	530 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	HLA-DMA	P28067	261 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PIGA	P37287	484 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MLLT3	P42568	568 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NDUFV1	P49821	464 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PTPN5	P54829	565 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SRSF11	Q05519	484 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	RING1	Q06587	406 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DNASE1L3	Q13609	305 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	RAPSN	Q13702	412 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ARHGEF6	Q15052	776 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NR6A1	Q15406	480 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TRIP4	Q15650	581 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	AP5B1	Q2VPB7	878 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PGS1	Q32NB8	556 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DUSP28	Q4G0W2	176 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MARCH8	Q5T0T0	291 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	C10orf62	Q5T681	223 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	WSCD1	Q658N2	575 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NEK5	Q6P3R8	708 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	EIF3M	Q7L2H7	374 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	VN1R5	Q7Z5H4	357 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DPP9	Q86TI2	863 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MON1A	Q86VX9	555 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC30A8	Q8IWU4	369 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ARRDC4	Q8NCT1	418 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZMIZ2	Q8NF64	920 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MOCOS	Q96EN8	888 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MYO19	Q96H55	970 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CDKN2AIPNL	Q96HQ2	116 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CELF6	Q96J87	481 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TMEM74	Q96NL1	305 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DEPDC7	Q96QD5	511 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CLSTN3	Q9BQT9	956 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	AGO3	Q9H9G7	860 aa	Known RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ASAH2	Q9NR71	780 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	KRT84	Q9NSB2	600 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	STMN3	Q9NZ72	180 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CAB39	Q9Y376	341 aa	Predicted RBP	11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PKP3	Q9Y446	797 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PCDHGA3	Q9Y5H0	932 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NOX1	Q9Y5S8	564 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PMF1-BGLAP	U3KQ54	211 aa		11.5	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZFC3H1	O60293	1989 aa	Known RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TEX51	A0A1B0GUA7	166 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PROM1	O43490	865 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SIX3	O95343	332 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MT-ND2	P03891	347 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SEMG1	P04279	462 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CBSL	P0DN79	551 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GAA	P10253	952 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CKMT1A	P12532	417 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	BDNF	P23560	247 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CD6	P30203	668 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CBS	P35520	551 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CD86	P42081	329 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GZMM	P51124	257 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZNF140	P52738	457 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FOXA1	P55317	472 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	OR2B6	P58173	313 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MRPS15	P82914	257 aa	Known RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TSPY1	Q01534	308 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	IFITM2	Q01629	132 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SCN1B	Q07699	218 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NPRL3	Q12980	569 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DGKZ	Q13574	1117 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TIGD6	Q17RP2	521 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms