RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ANKRD34BA5PLL1 514 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 NCF1BA6NI72 391 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 NCF1CA8MVU1 366 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 TNFRSF10BO14763 440 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 FADS2O95864 444 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 OTCP00480 354 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 SERPINA1P01009 418 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 PGRP06401 933 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 NCF1P14598 390 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 DGCR6Q14129 220 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 HABP4Q5JVS0 413 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 CCDC81Q6ZN84 652 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 TP53INP1Q96A56 240 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 SNX18Q96RF0 628 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 CLMPQ9H6B4 373 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 NUDT5Q9UKK9 219 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 SAMD4AQ9UPU9 718 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 WNT9AO14904 365 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 MUSKO15146 869 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 TBX1O43435 398 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 RGS14O43566 566 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 MITFO75030 526 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 FAM20BO75063 409 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 DLGAP3O95886 979 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 MOCS2O96007 188 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 SERPINF2P08697 491 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 PCSK2P16519 638 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 POLR2EP19388 210 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 PAX3P23760 479 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 DAPP51397 102 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 FAM174BQ3ZCQ3 159 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 TIGD5Q53EQ6 642 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 MLIPQ5VWP3 458 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 OR2T5Q6IEZ7 315 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 METTL23Q86XA0 190 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 OR2T29Q8NH02 315 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 CD200R1Q8TD46 325 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 CAPSLQ8WWF8 208 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 KCNJ9Q92806 393 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 RPL3LQ92901 407 aaKnown RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 NCLNQ969V3 563 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 CPPED1Q9BRF8 314 aaPredicted RBP17.39■□□□□ 0.37
NUP54-205ENST00000507257 NACA2Q9H009 215 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 ELP3Q9H9T3 547 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 VNN3Q9NY84 501 aa17.39■□□□□ 0.37
NUP54-205ENST00000507257 MYO16Q9Y6X6 1858 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 SLC28A1O00337 649 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 OR7A17O14581 309 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 RAD51BO15315 384 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 DPM1O60762 260 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 WDR47O94967 919 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 KRT75O95678 551 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 FPR1P21462 350 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 DNAJA1P31689 397 aaKnown RBP17.38■□□□□ 0.37
NUP54-205ENST00000507257 CLK1P49759 484 aaKnown RBP17.38■□□□□ 0.37
NUP54-205ENST00000507257 YBEYP58557 167 aaPredicted RBP17.38■□□□□ 0.37
NUP54-205ENST00000507257 ABHD18Q0P651 414 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 SERINC3Q13530 473 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 TBCEQ15813 527 aaPredicted RBP17.38■□□□□ 0.37
NUP54-205ENST00000507257 PTPRNQ16849 979 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 AGAP6Q5VW22 663 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 KIAA1614Q5VZ46 1190 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 DESI1Q6ICB0 168 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 ZDHHC21Q8IVQ6 265 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 OR4F6Q8NGB9 312 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 NETO1Q8TDF5 533 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 LINGO1Q96FE5 620 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 AGAP4Q96P64 663 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 DPY30Q9C005 99 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 KCNH6Q9H252 994 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 RIBC2Q9H4K1 309 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 IL1RAPQ9NPH3 570 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 PLCXD1Q9NUJ7 323 aa17.38■□□□□ 0.37
NUP54-205ENST00000507257 A0A096LPI6 279 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 AIREO43918 545 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 KRT20P35900 424 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TTPAP49638 278 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 DEFA1P59665 94 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 DEFA3P59666 94 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PPP1R8Q12972 351 aaKnown RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 ABRAXAS2Q15018 415 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TAF1AQ15573 450 aaPredicted RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 MS4A13Q5J8X5 152 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 COLEC12Q5KU26 742 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TPRG1LQ5T0D9 272 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 GOLGA7Q7Z5G4 137 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 HEATR4Q86WZ0 1026 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TTC29Q8NA56 475 aaPredicted RBP17.37■□□□□ 0.37
NUP54-205ENST00000507257 CDK15Q96Q40 435 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TBCDQ9BTW9 1192 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 NDEL1Q9GZM8 345 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 TMLHEQ9NVH6 421 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 MKLN1Q9UL63 735 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PLXNA3P51805 1871 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 DRGXA6NNA5 263 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PER2O15055 1255 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 SCO2O43819 266 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
NUP54-205ENST00000507257 CCNDBP1O95273 360 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms