RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 C9P02748 559 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 PKMP14618 531 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 OGNP20774 298 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 IVDP26440 423 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 AOAHP28039 575 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 SLC1A2P43004 574 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 MPP1Q00013 466 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 MC2RQ01718 297 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 PLOD1Q02809 727 aaPredicted RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 PDIA2Q13087 525 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 CALCOCO2Q13137 446 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 HIF1AQ16665 826 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 SPANXN3Q5MJ09 141 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 ARHGAP40Q5TG30 622 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 HIBCHQ6NVY1 386 aaPredicted RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 CEACAM20Q6UY09 585 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 CENPUQ71F23 418 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 TMEM135Q86UB9 458 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 LRRC6Q86X45 466 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 CILP2Q8IUL8 1156 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 IGDCC3Q8IVU1 814 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 TBC1D21Q8IYX1 336 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 LMNTD1Q8N9Z9 388 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 CALML6Q8TD86 181 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 LPGAT1Q92604 370 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 FOPNLQ96NB1 174 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 TCF12Q99081 682 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 CPNE5Q9HCH3 593 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 PDP2Q9P2J9 529 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 GALPQ9UBC7 116 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 ZC3H7BQ9UGR2 993 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 FBXO5Q9UKT4 447 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 SLC39A10Q9ULF5 831 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 RUVBL2Q9Y230 463 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 VPS9D1Q9Y2B5 631 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 UTP11Q9Y3A2 253 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 FAM169AQ9Y6X4 670 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 A0A087WV48 116 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 FAM187AA6NFU0 413 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 SLC9B1P1A6NJY1 282 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 H3BMM5 538 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 BTN3A1O00481 513 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 KPNA5O15131 536 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 MAP3K7O43318 606 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 KDM1AO60341 852 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 S1PR4O95977 384 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ESR1P03372 595 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 EBLN1P0CF75 366 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 SAT1P21673 171 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 RPS3P23396 243 aaKnown RBP eCLIP10.73□□□□□ -0.699e-7■■■■□ 22.9
DDB1-222ENST00000543627 ACADLP28330 430 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 MAGEA3P43357 314 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 BDKRB1P46663 353 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 KPNA2P52292 529 aaKnown RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 SRSF6Q13247 344 aaKnown RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 CLN3Q13286 438 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 CUL1Q13616 776 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 TSTA3Q13630 321 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 COL9A2Q14055 689 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 CRYMQ14894 314 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 TYSND1Q2T9J0 566 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ZNF658BQ4V348 819 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 MANEAQ5SRI9 462 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 IGF2-ASQ6U949 168 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 UNC5AQ6ZN44 842 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 CLEC14AQ86T13 490 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 VASH2Q86V25 355 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 CCDC25Q86WR0 208 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 PALM2Q8IXS6 379 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ZBTB2Q8N680 514 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 IL22RA1Q8N6P7 574 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 BBOF1Q8ND07 529 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 OR5K2Q8NHB8 316 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 GABPB2Q8TAK5 448 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 IL17FQ96PD4 163 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 NDNQ99608 321 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 FAM167BQ9BTA0 163 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ASPSCR1Q9BZE9 553 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 DPH1Q9BZG8 443 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ZNF768Q9H5H4 540 aaKnown RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 ABCF3Q9NUQ8 709 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 INTS10Q9NVR2 710 aaKnown RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 ACTR10Q9NZ32 417 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 SLC17A6Q9P2U8 582 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 POLG2Q9UHN1 485 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ICKQ9UPZ9 632 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 PCDHGA7Q9Y5G6 932 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 MN1Q10571 1320 aaPredicted RBP10.73□□□□□ -0.69
DDB1-222ENST00000543627 APC2O95996 2303 aa10.73□□□□□ -0.69
DDB1-222ENST00000543627 ACACAQ13085 2346 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms