RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 IGHA2P01877 340 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 LINC00032P0C843 101 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 PRDX3P30048 256 aaKnown RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 HOXC13P31276 330 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 HADHAP40939 763 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 POLD2P49005 469 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SH3BP2P78314 561 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 GPLD1P80108 840 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 TCTN1Q2MV58 587 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZNF683Q8IZ20 524 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 PTGR2Q8N8N7 351 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 JPH3Q8WXH2 748 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 ITCHQ96J02 903 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZFYVE19Q96K21 471 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC25A23Q9BV35 468 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 TRIM15Q9C019 465 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SCML2Q9UQR0 700 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 MICAL3Q7RTP6 2002 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 NLRC5Q86WI3 1866 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 CENPXA8MT69 81 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 CBX4O00257 560 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 VNN2O95498 520 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 RRM2P31350 389 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 POU4F1Q01851 419 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 MEP1AQ16819 746 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 THAP5Q7Z6K1 395 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC22A15Q8IZD6 547 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC30A3Q99726 388 aa17■□□□□ 0.31
LDLRAP1-201ENST00000374338 UBA2Q9UBT2 640 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
LDLRAP1-201ENST00000374338 PTTG1O95997 202 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 APOA4P06727 396 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 NAGAP17050 411 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 PKLRP30613 574 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 AGTR2P50052 363 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 GRB7Q14451 532 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZNF181Q2M3W8 571 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZFP69Q49AA0 526 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 AGAP9Q5VTM2 703 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 AFMIDQ63HM1 303 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 FAM83FQ8NEG4 500 aaPredicted RBP16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 SCLYQ96I15 445 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 RNF145Q96MT1 663 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 MID1IP1Q9NPA3 183 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 FXYD1O00168 92 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 PSMD3O43242 534 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 TSPAN9O75954 239 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 RHOQP17081 205 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 CTRB1P17538 263 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 BNIP2Q12982 314 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 CTRB2Q6GPI1 263 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 LCN8Q6JVE9 175 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 CYP20A1Q6UW02 462 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLIRPQ9GZT3 109 aaKnown RBP16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 NECTIN3Q9NQS3 549 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 NSMCE4AQ9NXX6 385 aa16.99■□□□□ 0.31
LDLRAP1-201ENST00000374338 AGRPO00253 132 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 HAT1O14929 419 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 CD3EAPO15446 510 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC2A3P11169 496 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 FCGR1AP12314 374 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 GFAPP14136 432 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 ITGB6P18564 788 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 CYP2C18P33260 490 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 TIAL1Q01085 375 aaKnown RBP eCLIP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 HACD2Q6Y1H2 254 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 IDO2Q6ZQW0 420 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 DCP1BQ8IZD4 617 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 UMODL1-AS1Q8N2C9 162 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 OR4K2Q8NGD2 314 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 HDAC2Q92769 488 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 CDK15Q96Q40 435 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 GSTO2Q9H4Y5 243 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 INTS10Q9NVR2 710 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PAQR5Q9NXK6 330 aaPredicted RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PNMA8BQ9ULN7 279 aaPredicted RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PDZK1P1A8MUH7 402 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 NOBOXO60393 691 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PCMT1P22061 227 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 SLC6A2P23975 617 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 OR3A3P47888 321 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PAQR3Q6TCH7 311 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 GDPD3Q7L5L3 318 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 SVOPQ8N4V2 548 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 GRPEL2Q8TAA5 225 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 BRSK1Q8TDC3 778 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 DMRTB1Q96MA1 342 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 MKRN2Q9H000 416 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZNF639Q9UID6 485 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PDE10AQ9Y233 779 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 SZT2Q5T011 3432 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 PTPRDP23468 1912 aa16.98■□□□□ 0.31
LDLRAP1-201ENST00000374338 MTMR11A4FU01 709 aa16.97■□□□□ 0.31
LDLRAP1-201ENST00000374338 ZNF99A8MXY4 864 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-201ENST00000374338 CDC7O00311 574 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms