RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 BEND7Q8N7W2 519 aaPredicted RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 OR4K2Q8NGD2 314 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 APOBEC4Q8WW27 367 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 UBXN4Q92575 508 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 CALR3Q96L12 384 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 GORASP1Q9BQQ3 440 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 OSBPL8Q9BZF1 889 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 ASB8Q9H765 288 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 EFR3BQ9Y2G0 817 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 PCDHB3Q9Y5E6 796 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 MRPS18BQ9Y676 258 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 ASH1LQ9NR48 2969 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 SPTA1P02549 2419 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 SETXQ7Z333 2677 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 C5orf60A6NFR6 353 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 KCNN4O15554 427 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 PJA2O43164 708 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 SPAG6O75602 509 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 SRP72O76094 671 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 RBP3P10745 1247 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 MTHFD1P11586 935 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 PSMB4P28070 264 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 CETN2P41208 172 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 PPP1CAP62136 330 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.58■□□□□ 0.89
VSX1-206ENST00000444511 CRTC2Q53ET0 693 aaPredicted RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 ANKRD20A2Q5SQ80 823 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 ANKRD20A1Q5TYW2 823 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 ANKRD20A3Q5VUR7 823 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 METRNLQ641Q3 311 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 DARS2Q6PI48 645 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 RANBP10Q6VN20 620 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 SIDT2Q8NBJ9 832 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 WWP1Q9H0M0 922 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 PDE7BQ9NP56 450 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 FAM8A1Q9UBU6 413 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 FKBPLQ9UIM3 349 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 CROTQ9UKG9 612 aa20.58■□□□□ 0.89
VSX1-206ENST00000444511 CFAP20Q9Y6A4 193 aaKnown RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 EPN1Q9Y6I3 576 aaPredicted RBP20.58■□□□□ 0.89
VSX1-206ENST00000444511 TLN1Q9Y490 2541 aaKnown RBP20.57■□□□□ 0.88
VSX1-206ENST00000444511 IGHV5-51A0A0C4DH38 117 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 CCDC66A2RUB6 948 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 KLHL33A6NCF5 533 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 MGAT4DA6NG13 374 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 SOWAHDA6NJG2 315 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 CRTAMO95727 393 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 CCNYL3P0C7X3 344 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 F8A1P23610 371 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 PTPN7P35236 360 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 ADRA1AP35348 466 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 ARL4DP49703 201 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 RWDD2BP57060 319 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 TUBB3Q13509 450 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 OLIG2Q13516 323 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 ATP1A1-AS1Q5TC04 95 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 C9orf43Q8TAL5 461 aaPredicted RBP20.57■□□□□ 0.88
VSX1-206ENST00000444511 DCUN1D1Q96GG9 259 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 SLC41A2Q96JW4 573 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 C12orf66Q96MD2 445 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 PANX2Q96RD6 677 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 FAM118BQ9BPY3 351 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 ACSL5Q9ULC5 683 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 KCTD3Q9Y597 815 aa20.57■□□□□ 0.88
VSX1-206ENST00000444511 RCCD1A6NED2 376 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 KATNA1O75449 491 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 MT-ND3P03897 115 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 SLC35G4P0C7Q5 338 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 PDE1BQ01064 536 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 SEPT6Q14141 434 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 DNTTIP2Q5QJE6 756 aaKnown RBP20.56■□□□□ 0.88
VSX1-206ENST00000444511 TMTC1Q8IUR5 882 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 OR2L2Q8NH16 312 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 CCDC110Q8TBZ0 833 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 NAT14Q8WUY8 206 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 LRRC45Q96CN5 670 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 SPATA13Q96N96 652 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 PPP1R2P1Q96PQ5 205 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 INSM2Q96T92 566 aaPredicted RBP20.56■□□□□ 0.88
VSX1-206ENST00000444511 CD180Q99467 661 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 SEMA5BQ9P283 1151 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 CRLS1Q9UJA2 301 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 KCND3Q9UK17 655 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 RARRES3Q9UL19 164 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 PADI1Q9ULC6 663 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 DUSP10Q9Y6W6 482 aa20.56■□□□□ 0.88
VSX1-206ENST00000444511 UBA6A0AVT1 1052 aaPredicted RBP20.55■□□□□ 0.88
VSX1-206ENST00000444511 OR5K3A6NET4 321 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 TJP3O95049 919 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 PYGMP11217 842 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 RALBP11234 206 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 FOLR1P15328 257 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 ACY1Q03154 408 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 TLE1Q04724 770 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 GSE1Q14687 1217 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 KCNAB1Q14722 419 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 BCL7AQ4VC05 210 aa20.55■□□□□ 0.88
VSX1-206ENST00000444511 DUS1LQ6P1R4 473 aaKnown RBP20.55■□□□□ 0.88
VSX1-206ENST00000444511 OOSP2Q86WS3 158 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms