RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 KRCC1Q9NPI7 259 aaPredicted RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 WSB2Q9NYS7 404 aaPredicted RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 OR6C3Q9NZP0 311 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 PADI1Q9ULC6 663 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 BTBD3Q9Y2F9 522 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 FAM169AQ9Y6X4 670 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 MS4A18H0YCH9 400 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ATP2A1O14983 1001 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 PAPSS1O43252 624 aaPredicted RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MITFO75030 526 aaPredicted RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 CIAO1O76071 339 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ACTN1P12814 892 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ANXA7P20073 488 aaKnown RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TNFRSF1BP20333 461 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ACADLP28330 430 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 CCND3P30281 292 aaPredicted RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 BTDP43251 543 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ME1P48163 572 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 METAP2P50579 478 aaKnown RBP eCLIP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 HMGCS2P54868 508 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MRPS5P82675 430 aaKnown RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MRPS34P82930 218 aaKnown RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MECOMQ03112 1051 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TRAF1Q13077 416 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 CCL14Q16627 93 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TMEM266Q2M3C6 531 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TMEM198Q66K66 360 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ADGRA1Q86SQ6 560 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TSPAN33Q86UF1 283 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 DNAAF5Q86Y56 855 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 SRRM1Q8IYB3 904 aaKnown RBP5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 HACE1Q8IYU2 909 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 TDHQ8IZJ6 230 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 SPATA6LQ8N4H0 392 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MIGA1Q8NAN2 632 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 KCTD6Q8NC69 237 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 SLC25A28Q96A46 364 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 C1QTNF1Q9BXJ1 281 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 AP1M1Q9BXS5 423 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 PORCNQ9H237 461 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 C11orf49Q9H6J7 331 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 DNAJC18Q9H819 358 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 LTB4R2Q9NPC1 389 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZBTB40Q9NUA8 1239 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 C11orf21Q9P2W6 132 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 RCOR1Q9UKL0 485 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 CLIC4Q9Y696 253 aa5.62□□□□□ -1.51
RNU4-39P-201ENST00000362455 MROH7-TTC4A0A0A0MT08 1334 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 IGLV5-39A0A0G2JS06 123 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 A0A1W2PR77 199 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 GLOD5A6NK44 160 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 J3KR12 359 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 OGG1O15527 345 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 ITM2AO43736 263 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 DKC1O60832 514 aaKnown RBP eCLIP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 GPC4O75487 556 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 DAB1O75553 588 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CNMDO75829 334 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CYP1A2P05177 515 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 G6PDP11413 515 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CAPN2P17655 700 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CYP2B6P20813 491 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 MAOAP21397 527 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 EIF2S3P41091 472 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRCPP42785 496 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 ENTPD1P49961 510 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 STAT2P52630 851 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CTTNQ14247 550 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CCDC96Q2M329 555 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 EIF2S3LQ2VIR3 472 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 FAM133BQ5BKY9 247 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 GGNBP1Q5YKI7 109 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 SIGIRRQ6IA17 410 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 METTL2BQ6P1Q9 378 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 Q6ZTK2 550 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 SHFQ7M4L6 423 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 OR8K5Q8NH50 307 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 ARAP2Q8WZ64 1704 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 METTL2AQ96IZ6 378 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 NLRP4Q96MN2 994 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 GCNAQ96QF7 691 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 FIZ1Q96SL8 496 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 PAFAH2Q99487 392 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 APOL6Q9BWW8 343 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 KLHL4Q9C0H6 718 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 SPRTNQ9H040 489 aaPredicted RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 KCNN2Q9H2S1 579 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 PPP1R3EQ9H7J1 279 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 HMG20BQ9P0W2 317 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRUNE2Q8WUY3 3088 aa5.61□□□□□ -1.51
RNU4-39P-201ENST00000362455 A0A1B0GUL6 1792 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 PTPRCP08575 1304 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 LRRC72A6NJI9 287 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 TIMM23O14925 209 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms