RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GSDMCQ9BYG8 508 aa15.46■□□□□ 0.07
USB1-208ENST00000563207 STRADBQ9C0K7 418 aa15.46■□□□□ 0.07
USB1-208ENST00000563207 ARFGAP3Q9NP61 516 aa15.46■□□□□ 0.07
USB1-208ENST00000563207 TRNAU1APQ9NX07 287 aaKnown RBP15.46■□□□□ 0.07
USB1-208ENST00000563207 TMEM9Q9P0T7 183 aa15.46■□□□□ 0.07
USB1-208ENST00000563207 CNOT6Q9ULM6 557 aaKnown RBP15.46■□□□□ 0.07
USB1-208ENST00000563207 UTP11Q9Y3A2 253 aaKnown RBP15.46■□□□□ 0.07
USB1-208ENST00000563207 ARL5AQ9Y689 179 aa15.46■□□□□ 0.07
USB1-208ENST00000563207 TCRBV7S3A2A0A539 114 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 MAGEB16A2A368 324 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 C9orf172C9J069 976 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 H7C0S8 307 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 RAD51CO43502 376 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 SEC31AO94979 1220 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 SLC4A1P02730 911 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 IVLP07476 585 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 JMJD7P0C870 316 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 PNLIPP16233 465 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 WT1P19544 449 aaPredicted RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 CD1CP29017 333 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ACTR1BP42025 376 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ARSDP51689 593 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ZNF140P52738 457 aaPredicted RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 MAPK10P53779 464 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 DRG2P55039 364 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 UCNP55089 124 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ACTR1AP61163 376 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ILF3Q12906 894 aaKnown RBP eCLIP15.45■□□□□ 0.06
USB1-208ENST00000563207 ITGA9Q13797 1035 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 GLE1Q53GS7 698 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 PYCR3Q53H96 274 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 PCID2Q5JVF3 399 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ZNF648Q5T619 568 aaPredicted RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 IZUMO3Q5VZ72 239 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 CCDC81Q6ZN84 652 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ZNF534Q76KX8 674 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 ZNF438Q7Z4V0 828 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 VASH2Q86V25 355 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 PPHLN1Q8NEY8 458 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 SNRNP27Q8WVK2 155 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 USP7Q93009 1102 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 SCARF2Q96GP6 870 aaPredicted RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 COX14Q96I36 57 aa15.45■□□□□ 0.06
USB1-208ENST00000563207 MRM3Q9HC36 420 aaKnown RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 NLE1Q9NVX2 485 aaPredicted RBP15.45■□□□□ 0.06
USB1-208ENST00000563207 IGHV5-10-1A0A0J9YXX1 117 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 GLYATL1P3A0A0U1RQE8 302 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 RHPN2P1A8MT19 583 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 FADS2P1A8MWK0 482 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 PYCARD-AS1I3L0S3 204 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 ERVH48-1M5A8F1 160 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 TMEM63AO94886 807 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 CSF2RBP32927 897 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 SESN2P58004 480 aaPredicted RBP15.44■□□□□ 0.06
USB1-208ENST00000563207 SEPT6Q14141 434 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 DNTTIP2Q5QJE6 756 aaKnown RBP15.44■□□□□ 0.06
USB1-208ENST00000563207 ANKRD22Q5VYY1 191 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 C8orf74Q6P047 294 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 CAND1Q86VP6 1230 aaKnown RBP15.44■□□□□ 0.06
USB1-208ENST00000563207 JPH3Q8WXH2 748 aaPredicted RBP15.44■□□□□ 0.06
USB1-208ENST00000563207 SERPINB12Q96P63 405 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 VPS35Q96QK1 796 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 TRIM51Q9BSJ1 452 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 SPATA16Q9BXB7 569 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 BPIFA1Q9NP55 256 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 IL26Q9NPH9 171 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
USB1-208ENST00000563207 WHRNQ9P202 907 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 TCAF1Q9Y4C2 921 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 PCDHGA7Q9Y5G6 932 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 TENM4Q6N022 2769 aa15.44■□□□□ 0.06
USB1-208ENST00000563207 BOD1L1Q8NFC6 3051 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 SDR42E2A6NKP2 422 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 DNAJC6O75061 913 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 ASMTLO95671 621 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 CPNE6O95741 557 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 MAGEA3P43357 314 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 CAV1Q03135 178 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 ACVR1Q04771 509 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 CALCOCO2Q13137 446 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 EIF3IQ13347 325 aaKnown RBP15.43■□□□□ 0.06
USB1-208ENST00000563207 NR1D2Q14995 579 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 TSTD2Q5T7W7 516 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 DUPD1Q68J44 220 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 HIBCHQ6NVY1 386 aaPredicted RBP15.43■□□□□ 0.06
USB1-208ENST00000563207 PIM3Q86V86 326 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 CCDC74BQ96LY2 380 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 OR2M4Q96R27 311 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 CCNL2Q96S94 520 aaPredicted RBP15.43■□□□□ 0.06
USB1-208ENST00000563207 KIFC1Q9BW19 673 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 L2HGDHQ9H9P8 463 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 SAMD15Q9P1V8 674 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 ANAPC5Q9UJX4 755 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 SDK2Q58EX2 2172 aa15.43■□□□□ 0.06
USB1-208ENST00000563207 IGHV1OR21-1A0A087WYE8 117 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 GPR89AB7ZAQ6 455 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 TMX2-CTNND1H3BSU7 103 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 NVLO15381 856 aaKnown RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 BUD23O43709 281 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms