RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GATAD2AQ86YP4 633 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DENND6AQ8IWF6 608 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 KLHL23Q8NBE8 558 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FAM156AQ8NDB6 213 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 PHC3Q8NDX5 983 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 AZIN2Q96A70 460 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MYO19Q96H55 970 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 HHIPL1Q96JK4 782 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 HAPLN3Q96S86 360 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 BRD9Q9H8M2 597 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 UGT1A7Q9HAW7 530 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 UGT1A10Q9HAW8 530 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 UGT1A8Q9HAW9 530 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 RPRD1BQ9NQG5 326 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 POLE3Q9NRF9 147 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MRPL17Q9NRX2 175 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 TRMT13Q9NUP7 481 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 CMTM6Q9NX76 183 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FNIP2Q9P278 1114 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TRAV19A0A0A6YYK7 116 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 A0A1W2PQH9 124 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MOXD2PA6NHM9 499 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CXorf49A8MYA2 514 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 AP3D1O14617 1153 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MSI1O43347 362 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 CCNKO75909 580 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SLC25A14O95258 325 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 FYNP06241 537 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CHRNGP07510 517 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DLDP09622 509 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 RCVRNP35243 200 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 PRKAG1P54619 331 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ERVK-8P63133 956 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CYP4F2P78329 520 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 RHDQ02161 417 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DSC2Q02487 901 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SLC25A11Q02978 314 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 CYP4F3Q08477 520 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DPY19L1Q2PZI1 675 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SLC9A4Q6AI14 798 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TXNRD3NBQ6F5E7 133 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TAC4Q86UU9 113 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 GPR156Q8NFN8 814 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TEX47Q8TBZ9 253 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 THG1LQ9NWX6 298 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 ZNF510Q9Y2H8 683 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 COQ6Q9Y2Z9 468 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 RAI2Q9Y5P3 530 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 LYVE1Q9Y5Y7 322 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 KIAA1217Q5T5P2 1943 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 NDUFS2O75306 463 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FADS2O95864 444 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 DHFRP00374 187 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MMP3P08254 477 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CTPS1P17812 591 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MYL9P24844 172 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CD52P31358 61 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ACLYP53396 1101 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SLC5A3P53794 718 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SRP54P61011 504 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 COPZ1P61923 177 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ECT2LQ008S8 904 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FOXM1Q08050 763 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TAF10Q12962 218 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CCL14Q16627 93 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TYSND1Q2T9J0 566 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 USP41Q3LFD5 358 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SPATS1Q496A3 300 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 NADK2Q4G0N4 442 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SULT1C3Q6IMI6 304 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 NEK5Q6P3R8 708 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 C17orf99Q6UX52 265 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TPGS1Q6ZTW0 290 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CXXC5Q7LFL8 322 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 RAB43Q86YS6 212 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FAM20CQ8IXL6 584 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SLC34A3Q8N130 599 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 GLIS1Q8NBF1 620 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 PIH1D2Q8WWB5 315 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DDX1Q92499 740 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 OXCT2Q9BYC2 517 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 TMEM9Q9P0T7 183 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 RAB23Q9ULC3 237 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ITM2AO43736 263 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 PRG2P13727 222 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CLCN2P51788 898 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 NRG1Q02297 640 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 ZNF33AQ06730 810 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 DAG1Q14118 895 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 RBM48Q5RL73 367 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 EPGNQ6UW88 154 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FRMD7Q6ZUT3 714 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 LMO3Q8TAP4 145 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 TRIM8Q9BZR9 551 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ACSS2Q9NR19 701 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms