RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SRRM5B3KS81 715 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 M0QZ24 198 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ACKR2O00590 384 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PEX12O00623 359 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ZNF197O14709 1029 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 IRAK2O43187 625 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 GPRIN2O60269 458 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 GPR137BO60478 399 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 BMP10O95393 424 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 C22orf31O95567 290 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MLYCDO95822 493 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 CLDN1O95832 211 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 HPRP00739 348 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MELTFP08582 738 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 KLK2P20151 261 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MTHFRP42898 656 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 GABRB2P47870 512 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ZFP36L2P47974 494 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 CDH11P55287 796 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 GSCP56915 257 aaPredicted RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 CDR2Q01850 454 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ICA1Q05084 483 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ZFP36L1Q07352 338 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 FOXO1Q12778 655 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MAD2L1Q13257 205 aaPredicted RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 E2F5Q15329 346 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 TIGD6Q17RP2 521 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 USP41Q3LFD5 358 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 XKR3Q5GH77 459 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 C6orf141Q5SZD1 244 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 RSBN1Q5VWQ0 802 aaPredicted RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 TXNDC8Q6A555 127 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PAPD4Q6PIY7 484 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 NHLRC1Q6VVB1 395 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PQLC2Q6ZP29 291 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 RTN4RL2Q86UN3 420 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 HOGA1Q86XE5 327 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PTOV1Q86YD1 416 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SUGP1Q8IWZ8 645 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 RAB42Q8N4Z0 105 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 DCLK2Q8N568 766 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 NGEFQ8N5V2 710 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PLD5Q8N7P1 536 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 Q8NBF4 154 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 KLHL30-AS1Q8NEE0 82 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 AFG1LQ8WV93 481 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 HPSE2Q8WWQ2 592 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SUSD6Q92537 303 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 STAMQ92783 540 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SLCO2A1Q92959 643 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 TOMM40LQ969M1 308 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SLC47A1Q96FL8 570 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PDLIM5Q96HC4 596 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 ZIM3Q96PE6 472 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 RMDN3Q96TC7 470 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SLX1AQ9BQ83 275 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MGME1Q9BQP7 344 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 PCGF1Q9BSM1 259 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 H2AFJQ9BTM1 129 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 DGCR6LQ9BY27 220 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 MROH8Q9H579 483 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 GNB4Q9HAV0 340 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 FLRT3Q9NZU0 649 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 KIF17Q9P2E2 1029 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 CTSZQ9UBR2 303 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ZNF107Q9UII5 783 aaPredicted RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 SLC7A7Q9UM01 511 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 LRCH1Q9Y2L9 728 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SLC6A5Q9Y345 797 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 RRP7AQ9Y3A4 280 aaKnown RBP0.65□□□□□ -2.31
COPB1-212ENST00000534771 KIF25-AS1Q9Y6Z4 181 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 IGKV6-21A0A0C4DH24 114 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 FAM220BPB1ANY3 271 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 H0Y9J4 135 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 TAF4O00268 1085 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 IPO5O00410 1097 aaKnown RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 VCYO14598 125 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 KLF11O14901 512 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 TACC1O75410 805 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 FAM155BO75949 473 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 WISP2O76076 250 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 KRT6AP02538 564 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 KRT6BP04259 564 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 FOLR2P14207 255 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 MGMTP16455 207 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 CKMT2P17540 419 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 HOXC9P31274 260 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 MAGEA11P43364 429 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 KRT6CP48668 564 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 GNAQP50148 359 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 ACTR2P61160 394 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 EFNB1P98172 346 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 NDPQ00604 133 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 CALCOCO2Q13137 446 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 PICALMQ13492 652 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 LY6DQ14210 128 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 DRAP1Q14919 205 aaPredicted RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 P2RY6Q15077 328 aa0.64□□□□□ -2.31
COPB1-212ENST00000534771 RNPS1Q15287 305 aaKnown RBP0.64□□□□□ -2.31
COPB1-212ENST00000534771 ANKRD1Q15327 319 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms