RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 RFXANKO14593 260 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 COCHO43405 550 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 GJB3O75712 270 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 CLDN7O95471 211 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ADH1AP07327 375 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ACRP10323 421 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ZNF37AP17032 561 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 IFNA8P32881 189 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 GPC1P35052 558 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 TLE2Q04725 743 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 HERC3Q15034 1050 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 RABL3Q5HYI8 236 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 OR10A6Q8NH74 314 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 NRG4Q8WWG1 115 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 TMEM74Q96NL1 305 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 CLK4Q9HAZ1 481 aaKnown RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 NUDT4Q9NZJ9 180 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 RAB26Q9ULW5 256 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 PADI4Q9UM07 663 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 CAPN14A8MX76 684 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 M0QZQ0 153 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 CYP11A1P05108 521 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 AQP1P29972 269 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 MAGEA3P43357 314 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 NUP107P57740 925 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 UFM1P61960 85 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 PPP1R8Q12972 351 aaKnown RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 FAM174BQ3ZCQ3 159 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 MPPE1Q53F39 396 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 GPR107Q5VW38 600 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ABRAXAS1Q6UWZ7 409 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 MRPL10Q7Z7H8 261 aaKnown RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 C2orf73Q8N5S3 287 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 KCNN1Q92952 543 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ASB9Q96DX5 294 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ZNF599Q96NL3 588 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 ZNF229Q9UJW7 825 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 TMCO1Q9UM00 188 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 USP3Q9Y6I4 520 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 SSC5DA1L4H1 1573 aa8.37□□□□□ -1.07
PTPRK-206ENST00000368215 MCM3APO60318 1980 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 SLC22A2O15244 555 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 FFAR2O15552 330 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 IL1BP01584 269 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CYP4B1P13584 511 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ALOX15P16050 662 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CTNNB1P35222 781 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 MAGEA11P43364 429 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 AP1S1P61966 158 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 GRB7Q14451 532 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 RAB41Q5JT25 222 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CST9Q5W186 159 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 PDSS2Q86YH6 399 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 C8orf59Q8N0T1 100 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 SMIM14Q96QK8 99 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 RERGLQ9H628 205 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 TLE6Q9H808 572 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 MRM3Q9HC36 420 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 FNIP2Q9P278 1114 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CNOT6Q9ULM6 557 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 GRID2O43424 1007 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CDK14O94921 469 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 PAPSS2O95340 614 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 KCNA5P22460 613 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ATP6V1E1P36543 226 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 HNF4AP41235 474 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CRATP43155 626 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CTC1Q2NKJ3 1217 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 RAET1GQ6H3X3 334 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ADHFE1Q8IWW8 467 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 TBC1D21Q8IYX1 336 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 LIX1Q8N485 282 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 TRPV1Q8NER1 839 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 LRRC58Q96CX6 371 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 KATNBL1Q9H079 304 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 WDR70Q9NW82 654 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 KCTD5Q9NXV2 234 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 GJD2Q9UKL4 321 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 MRPS23Q9Y3D9 190 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 COMMD3-BMI1R4GMX3 469 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ZNF831Q5JPB2 1677 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 KIAA1217Q5T5P2 1943 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 RECQL5O94762 991 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 JUNP05412 331 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 HSMCR30P0CW71 290 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 CHRNA6Q15825 494 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 NUDT18Q6ZVK8 323 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 KDM1BQ8NB78 822 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 SMG9Q9H0W8 520 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 MTIF3Q9H2K0 278 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 NSUN3Q9H649 340 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 DOCK5Q9H7D0 1870 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 C2orf78A6NCI8 922 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 TBC1D3BA6NDS4 549 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 RNASEH1O60930 286 aaKnown RBP8.36□□□□□ -1.07
PTPRK-206ENST00000368215 OAZ2O95190 189 aa8.36□□□□□ -1.07
PTPRK-206ENST00000368215 SLC10A3P09131 477 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms