RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 NLRP9Q7RTR0 991 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 SERPINA9Q86WD7 417 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 GKN2Q86XP6 184 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 FAM46DQ8NEK8 389 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 PPHLN1Q8NEY8 458 aaKnown RBP12.59□□□□□ -0.39
PHF20-201ENST00000339089 PATE1Q8WXA2 126 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 SGSM3Q96HU1 749 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 RUNDC3BQ96NL0 473 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
PHF20-201ENST00000339089 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
PHF20-201ENST00000339089 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
PHF20-201ENST00000339089 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 GPR34Q9UPC5 381 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 KCNK6Q9Y257 313 aa12.59□□□□□ -0.39
PHF20-201ENST00000339089 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
PHF20-201ENST00000339089 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 GOT2P00505 430 aaKnown RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 ALPPL2P10696 532 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ACP5P13686 325 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ITGALP20701 1170 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ACRV1P26436 265 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ARCN1P48444 511 aaKnown RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 CACNG1Q06432 222 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ILF3Q12906 894 aaKnown RBP eCLIP12.58□□□□□ -0.42e-6■■■□□ 16.8
PHF20-201ENST00000339089 ZNF658BQ4V348 819 aaPredicted RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 NAGSQ8N159 534 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 SGF29Q96ES7 293 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 GSDMCQ9BYG8 508 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 ZDHHC3Q9NYG2 299 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 MRFAP1Q9Y605 127 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 RP1P56715 2156 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 COL27A1Q8IZC6 1860 aaPredicted RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 AP3B1O00203 1094 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 BANF1O75531 89 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ZNF7P17097 686 aaPredicted RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 KCNA4P22459 653 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ACTR1BP42025 376 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 CLCNKAP51800 687 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ACTR1AP61163 376 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 LAMB3Q13751 1172 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 LRP8Q14114 963 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 TRADDQ15628 312 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ZRANB3Q5FWF4 1079 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 PERM1Q5SV97 790 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 TMEM220Q6QAJ8 160 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 TMEM135Q86UB9 458 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 LRRTM4Q86VH4 590 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 HOOK3Q86VS8 718 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.4
PHF20-201ENST00000339089 GDAP1Q8TB36 358 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ZNF592Q92610 1267 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 ULK4Q96C45 1275 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 CRLS1Q9UJA2 301 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 PRSS21Q9Y6M0 314 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 SLC30A1Q9Y6M5 507 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 CHD8Q9HCK8 2581 aa12.58□□□□□ -0.4
PHF20-201ENST00000339089 FREM2Q5SZK8 3169 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 SDR42E2A6NKP2 422 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 KMOO15229 486 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 TUBB4AP04350 444 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ADRB1P08588 477 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ITGA8P53708 1063 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 CLDN6P56747 220 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
PHF20-201ENST00000339089 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 DUPD1Q68J44 220 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 FAM83HQ6ZRV2 1179 aaPredicted RBP12.57□□□□□ -0.4
PHF20-201ENST00000339089 DET1Q7L5Y6 550 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
PHF20-201ENST00000339089 CLDN19Q8N6F1 224 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ARL10Q8N8L6 244 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 OR4L1Q8NH43 312 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ADAMTS14Q8WXS8 1223 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 TIMM29Q9BSF4 260 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 TRIM31Q9BZY9 425 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 KLC4Q9NSK0 619 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 GRHL1Q9NZI5 618 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 SCHIP1Q9P0W5 487 aaPredicted RBP12.57□□□□□ -0.4
PHF20-201ENST00000339089 PADI4Q9UM07 663 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 PCDHGA1Q9Y5H4 931 aa12.57□□□□□ -0.4
PHF20-201ENST00000339089 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 FAM187AA6NFU0 413 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 OR2AG2A6NM03 316 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 B4DGG1 531 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 BHMG1C9JSJ3 638 aaPredicted RBP12.56□□□□□ -0.4
PHF20-201ENST00000339089 POP7O75817 140 aaKnown RBP12.56□□□□□ -0.4
PHF20-201ENST00000339089 BRAFP15056 766 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 PMLP29590 882 aa12.56□□□□□ -0.4
PHF20-201ENST00000339089 MAZP56270 477 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms