RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YGR045CP53229 120 aa5.49□□□□□ -1.53
HSH49YOR319W ELA1P53861 379 aaPredicted RBP5.49□□□□□ -1.53
HSH49YOR319W NOG1Q02892 647 aaKnown RBP5.49□□□□□ -1.53
HSH49YOR319W YCR015CP25616 317 aa5.48□□□□□ -1.53
HSH49YOR319W OCA5P38738 679 aa5.48□□□□□ -1.53
HSH49YOR319W SLS1P42900 643 aa5.48□□□□□ -1.53
HSH49YOR319W MTR4P47047 1073 aaKnown RBP5.48□□□□□ -1.53
HSH49YOR319W RSM26P47141 266 aa5.48□□□□□ -1.53
HSH49YOR319W PEX13P80667 386 aa5.48□□□□□ -1.53
HSH49YOR319W ADP1P25371 1049 aa5.47□□□□□ -1.53
HSH49YOR319W NFS1P25374 497 aa5.47□□□□□ -1.53
HSH49YOR319W SMY2P32909 740 aaKnown RBP5.47□□□□□ -1.53
HSH49YOR319W SQT1P35184 431 aa5.47□□□□□ -1.53
HSH49YOR319W NNK1P36003 928 aa5.47□□□□□ -1.53
HSH49YOR319W ALT1P52893 592 aa5.47□□□□□ -1.53
HSH49YOR319W ULP1Q02724 621 aa5.47□□□□□ -1.53
HSH49YOR319W MSH3P25336 1018 aa5.46□□□□□ -1.54
HSH49YOR319W UGA4P32837 571 aa5.46□□□□□ -1.54
HSH49YOR319W NEM1P38757 446 aa5.46□□□□□ -1.54
HSH49YOR319W NNF1P47149 201 aa5.46□□□□□ -1.54
HSH49YOR319W ESC8Q08119 714 aa5.46□□□□□ -1.54
HSH49YOR319W RPT1P33299 467 aaKnown RBP5.45□□□□□ -1.54
HSH49YOR319W ATG14P38270 344 aa5.45□□□□□ -1.54
HSH49YOR319W JIP5Q06214 492 aaPredicted RBP5.45□□□□□ -1.54
HSH49YOR319W CDA2Q06703 312 aa5.45□□□□□ -1.54
HSH49YOR319W YAR028WP39548 234 aa5.44□□□□□ -1.54
HSH49YOR319W FYV10P40492 516 aa5.44□□□□□ -1.54
HSH49YOR319W EAR1Q03212 550 aa5.44□□□□□ -1.54
HSH49YOR319W FPR4Q06205 392 aaPredicted RBP5.44□□□□□ -1.54
HSH49YOR319W VMA4P22203 233 aaKnown RBP5.43□□□□□ -1.54
HSH49YOR319W TSA1P34760 196 aaKnown RBP5.43□□□□□ -1.54
HSH49YOR319W HSE1P38753 452 aa5.43□□□□□ -1.54
HSH49YOR319W PEX28P38848 579 aa5.43□□□□□ -1.54
HSH49YOR319W RMD1Q03441 430 aa5.43□□□□□ -1.54
HSH49YOR319W ADI1Q03677 179 aa5.43□□□□□ -1.54
HSH49YOR319W SSY1Q03770 852 aa5.43□□□□□ -1.54
HSH49YOR319W UTP5Q04177 643 aaKnown RBP5.43□□□□□ -1.54
HSH49YOR319W TOS4Q06266 489 aa5.43□□□□□ -1.54
HSH49YOR319W TRE1Q08919 783 aa5.43□□□□□ -1.54
HSH49YOR319W LAP2Q10740 671 aa5.43□□□□□ -1.54
HSH49YOR319W XKS1P42826 600 aa5.42□□□□□ -1.54
HSH49YOR319W YVC1Q12324 675 aa5.42□□□□□ -1.54
HSH49YOR319W FAA3P39002 694 aa5.41□□□□□ -1.54
HSH49YOR319W ORC3P54790 616 aa5.41□□□□□ -1.54
HSH49YOR319W YPL109CQ02981 657 aa5.41□□□□□ -1.54
HSH49YOR319W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
HSH49YOR319W RET1P22276 1149 aaKnown RBP5.4□□□□□ -1.54
HSH49YOR319W PRO1P32264 428 aa5.4□□□□□ -1.54
HSH49YOR319W GIP4P39732 760 aa5.4□□□□□ -1.54
HSH49YOR319W TAF1P46677 1066 aa5.4□□□□□ -1.54
HSH49YOR319W YNR063WP53749 607 aa5.4□□□□□ -1.54
HSH49YOR319W TPP1Q03796 238 aa5.4□□□□□ -1.54
HSH49YOR319W YLR257WQ06146 321 aaKnown RBP5.4□□□□□ -1.54
HSH49YOR319W PUS7Q08647 676 aaKnown RBP5.4□□□□□ -1.54
HSH49YOR319W HXK1P04806 485 aaKnown RBP5.39□□□□□ -1.55
HSH49YOR319W PEX7P39108 375 aa5.39□□□□□ -1.55
HSH49YOR319W YGL140CP53120 1219 aa5.39□□□□□ -1.55
HSH49YOR319W ESF1Q06344 628 aaKnown RBP5.39□□□□□ -1.55
HSH49YOR319W CLN2P20438 545 aa5.38□□□□□ -1.55
HSH49YOR319W THI80P35202 319 aa5.38□□□□□ -1.55
HSH49YOR319W ADD66P36040 267 aa5.38□□□□□ -1.55
HSH49YOR319W RDH54P38086 958 aa5.38□□□□□ -1.55
HSH49YOR319W SPR28Q04921 423 aa5.38□□□□□ -1.55
HSH49YOR319W RSA3Q05942 220 aaKnown RBP5.38□□□□□ -1.55
HSH49YOR319W HRK1Q08732 759 aaKnown RBP5.38□□□□□ -1.55
HSH49YOR319W LPX1Q12405 387 aaKnown RBP5.38□□□□□ -1.55
HSH49YOR319W MCM2P29469 868 aa5.37□□□□□ -1.55
HSH49YOR319W MAD1P40957 749 aa5.37□□□□□ -1.55
HSH49YOR319W MRPS18P42847 217 aa5.37□□□□□ -1.55
HSH49YOR319W YGR122WP53272 402 aa5.37□□□□□ -1.55
HSH49YOR319W DOS2P54858 310 aa5.37□□□□□ -1.55
HSH49YOR319W VPS16Q03308 798 aa5.37□□□□□ -1.55
HSH49YOR319W RKM2Q03942 479 aa5.37□□□□□ -1.55
HSH49YOR319W PIN2Q12057 282 aa5.37□□□□□ -1.55
HSH49YOR319W MCD1Q12158 566 aa5.37□□□□□ -1.55
HSH49YOR319W SEC23P15303 768 aaKnown RBP5.36□□□□□ -1.55
HSH49YOR319W PRP6P19735 899 aaPredicted RBP5.36□□□□□ -1.55
HSH49YOR319W PTC7P38797 343 aa5.36□□□□□ -1.55
HSH49YOR319W NMD3P38861 518 aaKnown RBP5.36□□□□□ -1.55
HSH49YOR319W IOC4Q04213 475 aa5.36□□□□□ -1.55
HSH49YOR319W EST2Q06163 884 aa5.36□□□□□ -1.55
HSH49YOR319W YOL098CQ12496 1037 aa5.36□□□□□ -1.55
HSH49YOR319W PRE9P23638 258 aaKnown RBP5.35□□□□□ -1.55
HSH49YOR319W BRN1P38170 754 aa5.35□□□□□ -1.55
HSH49YOR319W YHL012WP38709 493 aa5.35□□□□□ -1.55
HSH49YOR319W QNS1P38795 714 aaKnown RBP5.35□□□□□ -1.55
HSH49YOR319W PIC2P40035 300 aa5.35□□□□□ -1.55
HSH49YOR319W GTS1P40956 396 aa5.35□□□□□ -1.55
HSH49YOR319W VPS53P47061 822 aa5.35□□□□□ -1.55
HSH49YOR319W HEM13P11353 328 aaKnown RBP5.34□□□□□ -1.55
HSH49YOR319W TAF13P11747 167 aa5.34□□□□□ -1.55
HSH49YOR319W PEP7P32609 515 aa5.34□□□□□ -1.55
HSH49YOR319W MNR2P35724 969 aa5.34□□□□□ -1.55
HSH49YOR319W RPS26AP39938 119 aaKnown RBP5.34□□□□□ -1.55
HSH49YOR319W RPS26BP39939 119 aaKnown RBP5.34□□□□□ -1.55
HSH49YOR319W ALD6P54115 500 aaKnown RBP5.34□□□□□ -1.55
HSH49YOR319W RAD2P07276 1031 aa5.33□□□□□ -1.56
HSH49YOR319W CYC8P14922 966 aa5.33□□□□□ -1.56
HSH49YOR319W PET112P33893 541 aa5.33□□□□□ -1.56
HSH49YOR319W FLR1P38124 548 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms