RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W MXR1P40029 184 aa7.67□□□□□ -1.18
LSC1YOR142W EPL1P43572 832 aa7.67□□□□□ -1.18
LSC1YOR142W SCS3P53012 380 aa7.67□□□□□ -1.18
LSC1YOR142W YGL039WP53183 348 aaKnown RBP7.67□□□□□ -1.18
LSC1YOR142W VPS62P53285 467 aa7.67□□□□□ -1.18
LSC1YOR142W YDR461C-AQ2V2P7 80 aa7.67□□□□□ -1.18
LSC1YOR142W CDC19P00549 500 aaKnown RBP7.66□□□□□ -1.18
LSC1YOR142W YUR1P26725 428 aa7.66□□□□□ -1.18
LSC1YOR142W BCS1P32839 456 aa7.66□□□□□ -1.18
LSC1YOR142W RGT1P32862 1170 aa7.66□□□□□ -1.18
LSC1YOR142W MAL31P38156 614 aa7.66□□□□□ -1.18
LSC1YOR142W FMS1P50264 508 aa7.66□□□□□ -1.18
LSC1YOR142W ASE1P50275 885 aa7.66□□□□□ -1.18
LSC1YOR142W LSB1P53281 241 aa7.66□□□□□ -1.18
LSC1YOR142W SLD5Q03406 294 aa7.66□□□□□ -1.18
LSC1YOR142W MET7Q08645 548 aa7.66□□□□□ -1.18
LSC1YOR142W SUT2Q12286 268 aa7.66□□□□□ -1.18
LSC1YOR142W ERP3Q12403 225 aa7.66□□□□□ -1.18
LSC1YOR142W RKM4Q12504 494 aa7.66□□□□□ -1.18
LSC1YOR142W MET6P05694 767 aaKnown RBP7.65□□□□□ -1.18
LSC1YOR142W MATALPHA2P0CY08 210 aa7.65□□□□□ -1.18
LSC1YOR142W HMLALPHA2P0CY09 210 aa7.65□□□□□ -1.18
LSC1YOR142W STI1P15705 589 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
LSC1YOR142W MAC1P35192 417 aa7.65□□□□□ -1.18
LSC1YOR142W TOM71P38825 639 aaKnown RBP7.65□□□□□ -1.18
LSC1YOR142W YAF9P53930 226 aa7.65□□□□□ -1.18
LSC1YOR142W YMR321CQ04898 105 aa7.65□□□□□ -1.18
LSC1YOR142W YLR326WQ06170 240 aaKnown RBP7.65□□□□□ -1.18
LSC1YOR142W VIP1Q06685 1146 aaKnown RBP7.65□□□□□ -1.18
LSC1YOR142W GUD1Q07729 489 aa7.65□□□□□ -1.18
LSC1YOR142W YOR131CQ12486 218 aa7.65□□□□□ -1.18
LSC1YOR142W CIT1P00890 479 aa7.64□□□□□ -1.19
LSC1YOR142W TKL1P23254 680 aaKnown RBP7.64□□□□□ -1.19
LSC1YOR142W UGA4P32837 571 aa7.64□□□□□ -1.19
LSC1YOR142W DBP7P36120 742 aaKnown RBP7.64□□□□□ -1.19
LSC1YOR142W YDR341CQ05506 607 aaKnown RBP7.64□□□□□ -1.19
LSC1YOR142W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
LSC1YOR142W HCA4P20448 770 aaKnown RBP7.63□□□□□ -1.19
LSC1YOR142W DBP1P24784 617 aaKnown RBP7.63□□□□□ -1.19
LSC1YOR142W SWI4P25302 1093 aaKnown RBP7.63□□□□□ -1.19
LSC1YOR142W REG2P38232 338 aa7.63□□□□□ -1.19
LSC1YOR142W RXT2P38255 430 aa7.63□□□□□ -1.19
LSC1YOR142W PAN5P38787 379 aa7.63□□□□□ -1.19
LSC1YOR142W PCI8P40512 444 aa7.63□□□□□ -1.19
LSC1YOR142W YKE2P52553 114 aa7.63□□□□□ -1.19
LSC1YOR142W LIF1P53150 421 aa7.63□□□□□ -1.19
LSC1YOR142W ARP5P53946 755 aa7.63□□□□□ -1.19
LSC1YOR142W MSC6Q08818 692 aaKnown RBP7.63□□□□□ -1.19
LSC1YOR142W RNR2P09938 399 aaKnown RBP7.62□□□□□ -1.19
LSC1YOR142W RPL8AP17076 256 aaKnown RBP7.62□□□□□ -1.19
LSC1YOR142W LDH1P38139 375 aa7.62□□□□□ -1.19
LSC1YOR142W TGL3P40308 642 aa7.62□□□□□ -1.19
LSC1YOR142W PTA1Q01329 785 aaPredicted RBP7.62□□□□□ -1.19
LSC1YOR142W ISA1Q07821 250 aaPredicted RBP7.62□□□□□ -1.19
LSC1YOR142W OXR1Q08952 273 aa7.62□□□□□ -1.19
LSC1YOR142W VPS1P21576 704 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W SEC20P28791 383 aa7.61□□□□□ -1.19
LSC1YOR142W MCM4P30665 933 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W TFC4P33339 1025 aa7.61□□□□□ -1.19
LSC1YOR142W BMH2P34730 273 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W SIS2P36024 562 aa7.61□□□□□ -1.19
LSC1YOR142W UIP5P36137 443 aa7.61□□□□□ -1.19
LSC1YOR142W SUL1P38359 859 aa7.61□□□□□ -1.19
LSC1YOR142W KSP1P38691 1029 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W RPN10P38886 268 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W TPM2P40414 161 aa7.61□□□□□ -1.19
LSC1YOR142W AIM21P40563 679 aa7.61□□□□□ -1.19
LSC1YOR142W YJR107WP47145 328 aa7.61□□□□□ -1.19
LSC1YOR142W ENT3P47160 408 aa7.61□□□□□ -1.19
LSC1YOR142W CTF18P49956 741 aa7.61□□□□□ -1.19
LSC1YOR142W GIS4Q04233 774 aa7.61□□□□□ -1.19
LSC1YOR142W YLR407WQ06070 228 aa7.61□□□□□ -1.19
LSC1YOR142W WHI4Q07655 649 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W MAM3Q12296 706 aa7.61□□□□□ -1.19
LSC1YOR142W MDM20Q12387 796 aaKnown RBP7.61□□□□□ -1.19
LSC1YOR142W UBR2Q07963 1872 aa7.6□□□□□ -1.19
LSC1YOR142W POX1P13711 748 aa7.6□□□□□ -1.19
LSC1YOR142W CCT3P39077 534 aaKnown RBP7.6□□□□□ -1.19
LSC1YOR142W NOC2P39744 710 aaKnown RBP7.6□□□□□ -1.19
LSC1YOR142W YGL138CP53122 345 aa7.6□□□□□ -1.19
LSC1YOR142W TRM11Q12463 433 aa7.6□□□□□ -1.19
LSC1YOR142W RIF1P29539 1916 aa7.6□□□□□ -1.19
LSC1YOR142W PDC1P06169 563 aaKnown RBP7.59□□□□□ -1.19
LSC1YOR142W CDC6P09119 513 aa7.59□□□□□ -1.19
LSC1YOR142W MAK11P20484 414 aaKnown RBP7.59□□□□□ -1.19
LSC1YOR142W KTR2P33550 425 aa7.59□□□□□ -1.19
LSC1YOR142W FLR1P38124 548 aa7.59□□□□□ -1.19
LSC1YOR142W SKP2P42843 763 aa7.59□□□□□ -1.19
LSC1YOR142W YGR273CP53329 174 aa7.59□□□□□ -1.19
LSC1YOR142W GDE1Q02979 1223 aa7.59□□□□□ -1.19
LSC1YOR142W SMD2Q06217 110 aaKnown RBP7.59□□□□□ -1.19
LSC1YOR142W ECM30Q06673 1274 aa7.59□□□□□ -1.19
LSC1YOR142W RLF2Q12495 606 aa7.59□□□□□ -1.19
LSC1YOR142W ARP6Q12509 438 aa7.59□□□□□ -1.19
LSC1YOR142W PWP2P25635 923 aaKnown RBP7.58□□□□□ -1.2
LSC1YOR142W UBP11P36026 717 aa7.58□□□□□ -1.2
LSC1YOR142W OPY1P38271 328 aa7.58□□□□□ -1.2
LSC1YOR142W CIT3P43635 486 aa7.58□□□□□ -1.2
LSC1YOR142W RPS7BP48164 190 aaKnown RBP7.58□□□□□ -1.2
LSC1YOR142W ORC4P54791 529 aa7.58□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms