RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W RRP15Q06511 250 aaPredicted RBP7.4□□□□□ -1.22
VAM3YOR106W RAD2P07276 1031 aa7.39□□□□□ -1.23
VAM3YOR106W CYC8P14922 966 aa7.39□□□□□ -1.23
VAM3YOR106W RCM1P53972 490 aa7.39□□□□□ -1.23
VAM3YOR106W SEC23P15303 768 aaKnown RBP7.38□□□□□ -1.23
VAM3YOR106W MCM2P29469 868 aa7.38□□□□□ -1.23
VAM3YOR106W YNR063WP53749 607 aa7.38□□□□□ -1.23
VAM3YOR106W PUB1P32588 453 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
VAM3YOR106W PIC2P40035 300 aa7.37□□□□□ -1.23
VAM3YOR106W ADD66P36040 267 aa7.36□□□□□ -1.23
VAM3YOR106W RDH54P38086 958 aa7.36□□□□□ -1.23
VAM3YOR106W SPR28Q04921 423 aa7.36□□□□□ -1.23
VAM3YOR106W BRE4Q07660 1125 aa7.36□□□□□ -1.23
VAM3YOR106W TAF13P11747 167 aa7.35□□□□□ -1.23
VAM3YOR106W SEC8P32855 1065 aa7.35□□□□□ -1.23
VAM3YOR106W FYV10P40492 516 aa7.35□□□□□ -1.23
VAM3YOR106W RKM2Q03942 479 aa7.35□□□□□ -1.23
VAM3YOR106W EST2Q06163 884 aa7.35□□□□□ -1.23
VAM3YOR106W RET1P22276 1149 aaKnown RBP7.34□□□□□ -1.23
VAM3YOR106W PEP7P32609 515 aa7.34□□□□□ -1.23
VAM3YOR106W EAR1Q03212 550 aa7.34□□□□□ -1.23
VAM3YOR106W TPP1Q03796 238 aa7.34□□□□□ -1.23
VAM3YOR106W YLR257WQ06146 321 aaKnown RBP7.34□□□□□ -1.23
VAM3YOR106W ESF1Q06344 628 aaKnown RBP7.34□□□□□ -1.23
VAM3YOR106W MAG2Q06436 670 aaKnown RBP7.34□□□□□ -1.23
VAM3YOR106W DED1P06634 604 aaKnown RBP7.33□□□□□ -1.24
VAM3YOR106W GCD1P09032 578 aaPredicted RBP7.33□□□□□ -1.24
VAM3YOR106W SDH1Q00711 640 aa7.33□□□□□ -1.24
VAM3YOR106W OYE2Q03558 400 aaKnown RBP7.33□□□□□ -1.24
VAM3YOR106W RSA3Q05942 220 aaKnown RBP7.33□□□□□ -1.24
VAM3YOR106W PUS7Q08647 676 aaKnown RBP7.33□□□□□ -1.24
VAM3YOR106W HRK1Q08732 759 aaKnown RBP7.33□□□□□ -1.24
VAM3YOR106W HEM13P11353 328 aaKnown RBP7.32□□□□□ -1.24
VAM3YOR106W OYE3P41816 400 aaPredicted RBP7.32□□□□□ -1.24
VAM3YOR106W CTH1P47976 325 aa7.32□□□□□ -1.24
VAM3YOR106W YVC1Q12324 675 aa7.32□□□□□ -1.24
VAM3YOR106W VPS53P47061 822 aa7.31□□□□□ -1.24
VAM3YOR106W MRL1Q06815 381 aa7.31□□□□□ -1.24
VAM3YOR106W GLT1Q12680 2145 aaKnown RBP7.31□□□□□ -1.24
VAM3YOR106W NMD3P38861 518 aaKnown RBP7.3□□□□□ -1.24
VAM3YOR106W RMD1Q03441 430 aa7.3□□□□□ -1.24
VAM3YOR106W HDA2Q06629 674 aa7.3□□□□□ -1.24
VAM3YOR106W TRE1Q08919 783 aa7.3□□□□□ -1.24
VAM3YOR106W QNS1P38795 714 aaKnown RBP7.29□□□□□ -1.24
VAM3YOR106W ADP1P25371 1049 aa7.27□□□□□ -1.25
VAM3YOR106W SIW14P53965 281 aa7.27□□□□□ -1.25
VAM3YOR106W PTC5Q12511 572 aa7.27□□□□□ -1.25
VAM3YOR106W PRO1P32264 428 aa7.26□□□□□ -1.25
VAM3YOR106W YHL012WP38709 493 aa7.26□□□□□ -1.25
VAM3YOR106W YJL045WP47052 634 aa7.26□□□□□ -1.25
VAM3YOR106W ENT3P47160 408 aa7.26□□□□□ -1.25
VAM3YOR106W ROD1Q02805 837 aa7.26□□□□□ -1.25
VAM3YOR106W GCR1P07261 785 aa7.25□□□□□ -1.25
VAM3YOR106W ALG3P38179 458 aa7.25□□□□□ -1.25
VAM3YOR106W AFG2P32794 780 aa7.24□□□□□ -1.25
VAM3YOR106W PEX7P39108 375 aa7.24□□□□□ -1.25
VAM3YOR106W SSY1Q03770 852 aa7.24□□□□□ -1.25
VAM3YOR106W RAD27P26793 382 aa7.23□□□□□ -1.25
VAM3YOR106W PET112P33893 541 aa7.23□□□□□ -1.25
VAM3YOR106W SEA4P38164 1038 aa7.23□□□□□ -1.25
VAM3YOR106W PTC7P38797 343 aa7.23□□□□□ -1.25
VAM3YOR106W KIP1P28742 1111 aa7.22□□□□□ -1.25
VAM3YOR106W MKK2P32491 506 aa7.22□□□□□ -1.25
VAM3YOR106W MDL2P33311 773 aa7.22□□□□□ -1.25
VAM3YOR106W HSP78P33416 811 aa7.22□□□□□ -1.25
VAM3YOR106W GNP1P48813 663 aa7.22□□□□□ -1.25
VAM3YOR106W RAT1Q02792 1006 aaKnown RBP7.22□□□□□ -1.25
VAM3YOR106W RTT10Q08924 1013 aa7.22□□□□□ -1.25
VAM3YOR106W POL12P38121 705 aaPredicted RBP7.21□□□□□ -1.26
VAM3YOR106W GTS1P40956 396 aa7.21□□□□□ -1.26
VAM3YOR106W SAM35P14693 329 aa7.2□□□□□ -1.26
VAM3YOR106W YSC84P32793 468 aa7.2□□□□□ -1.26
VAM3YOR106W HXT13P39924 564 aa7.2□□□□□ -1.26
VAM3YOR106W HXT17P53631 564 aa7.2□□□□□ -1.26
VAM3YOR106W HXT15P54854 567 aa7.2□□□□□ -1.26
VAM3YOR106W YPL260WQ08977 551 aa7.2□□□□□ -1.26
VAM3YOR106W COQ4O13525 335 aa7.19□□□□□ -1.26
VAM3YOR106W SYP1P25623 870 aaKnown RBP7.19□□□□□ -1.26
VAM3YOR106W GPB2P39717 880 aa7.19□□□□□ -1.26
VAM3YOR106W AVT1P47082 602 aa7.19□□□□□ -1.26
VAM3YOR106W NBA1Q08229 501 aaKnown RBP7.19□□□□□ -1.26
VAM3YOR106W TMA46Q12000 345 aaKnown RBP7.19□□□□□ -1.26
VAM3YOR106W SPO21Q12411 609 aa7.19□□□□□ -1.26
VAM3YOR106W SRO9P25567 434 aaKnown RBP7.18□□□□□ -1.26
VAM3YOR106W CNN1P43618 361 aa7.18□□□□□ -1.26
VAM3YOR106W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
VAM3YOR106W DFG16Q99234 619 aa7.18□□□□□ -1.26
VAM3YOR106W CCZ1P38273 704 aa7.17□□□□□ -1.26
VAM3YOR106W FOL2P51601 243 aaKnown RBP7.17□□□□□ -1.26
VAM3YOR106W NAP1P25293 417 aaKnown RBP7.16□□□□□ -1.26
VAM3YOR106W AIM26P32858 118 aa7.16□□□□□ -1.26
VAM3YOR106W LRG1P35688 1017 aa7.16□□□□□ -1.26
VAM3YOR106W MNR2P35724 969 aa7.16□□□□□ -1.26
VAM3YOR106W RGD1P38339 666 aa7.16□□□□□ -1.26
VAM3YOR106W ECL1P48235 211 aa7.16□□□□□ -1.26
VAM3YOR106W TNA1P53322 534 aa7.16□□□□□ -1.26
VAM3YOR106W ORC3P54790 616 aa7.16□□□□□ -1.26
VAM3YOR106W HOS3Q02959 697 aaKnown RBP7.16□□□□□ -1.26
VAM3YOR106W LPX1Q12405 387 aaKnown RBP7.16□□□□□ -1.26
VAM3YOR106W DBP5P20449 482 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms