RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A RPS26BP39939 119 aaKnown RBP5.46□□□□□ -1.54
YSF3YNL138W-A SPR28Q04921 423 aa5.46□□□□□ -1.54
YSF3YNL138W-A GAS5Q08193 484 aa5.46□□□□□ -1.54
YSF3YNL138W-A NUP157P40064 1391 aaKnown RBP5.45□□□□□ -1.54
YSF3YNL138W-A YTA7P40340 1379 aa5.45□□□□□ -1.54
YSF3YNL138W-A TY3B-GQ99315 1547 aa5.45□□□□□ -1.54
YSF3YNL138W-A MCX1P38323 520 aaPredicted RBP5.45□□□□□ -1.54
YSF3YNL138W-A ICP55P40051 511 aa5.45□□□□□ -1.54
YSF3YNL138W-A LEM3P42838 414 aa5.45□□□□□ -1.54
YSF3YNL138W-A MAK10Q02197 733 aa5.45□□□□□ -1.54
YSF3YNL138W-A ULP1Q02724 621 aa5.45□□□□□ -1.54
YSF3YNL138W-A YSP2Q06681 1438 aa5.45□□□□□ -1.54
YSF3YNL138W-A POL5P39985 1022 aaKnown RBP5.44□□□□□ -1.54
YSF3YNL138W-A YGR122WP53272 402 aa5.44□□□□□ -1.54
YSF3YNL138W-A SPO71Q03868 1245 aa5.44□□□□□ -1.54
YSF3YNL138W-A HTS1P07263 546 aaKnown RBP5.43□□□□□ -1.54
YSF3YNL138W-A KAR2P16474 682 aaKnown RBP5.43□□□□□ -1.54
YSF3YNL138W-A SLN1P39928 1220 aaPredicted RBP5.43□□□□□ -1.54
YSF3YNL138W-A PRY1P47032 299 aa5.43□□□□□ -1.54
YSF3YNL138W-A YPL109CQ02981 657 aa5.43□□□□□ -1.54
YSF3YNL138W-A PHM7Q12252 991 aa5.43□□□□□ -1.54
YSF3YNL138W-A CYC8P14922 966 aa5.42□□□□□ -1.54
YSF3YNL138W-A SAC7P17121 654 aa5.42□□□□□ -1.54
YSF3YNL138W-A BUD9P53226 547 aa5.42□□□□□ -1.54
YSF3YNL138W-A BNR1P40450 1375 aa5.42□□□□□ -1.54
YSF3YNL138W-A RAD2P07276 1031 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-LR4P0C2I8 440 aaKnown RBP5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-DR6P0CX70 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-ER1P0CX71 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-LR2P0CX72 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-PLP0CX73 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-JR1P0CX74 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-LR3P0CX75 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-ML2P0CX76 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A ERS1P17261 260 aa5.41□□□□□ -1.54
YSF3YNL138W-A YCK2P23292 546 aaKnown RBP5.41□□□□□ -1.54
YSF3YNL138W-A PEP7P32609 515 aa5.41□□□□□ -1.54
YSF3YNL138W-A RSM26P47141 266 aa5.41□□□□□ -1.54
YSF3YNL138W-A PEX13P80667 386 aa5.41□□□□□ -1.54
YSF3YNL138W-A YMR187CQ03236 431 aa5.41□□□□□ -1.54
YSF3YNL138W-A ADI1Q03677 179 aa5.41□□□□□ -1.54
YSF3YNL138W-A ELG1Q12050 791 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-GR1Q12085 440 aa5.41□□□□□ -1.54
YSF3YNL138W-A YDR215CQ12240 137 aa5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-PR3Q6Q5H1 440 aaKnown RBP5.41□□□□□ -1.54
YSF3YNL138W-A TY1A-OLQ92392 440 aaKnown RBP5.41□□□□□ -1.54
YSF3YNL138W-A YAP3P38749 330 aa5.4□□□□□ -1.54
YSF3YNL138W-A PIC2P40035 300 aa5.4□□□□□ -1.54
YSF3YNL138W-A UTP22P53254 1237 aaPredicted RBP5.4□□□□□ -1.54
YSF3YNL138W-A DSE4P53753 1117 aa5.4□□□□□ -1.54
YSF3YNL138W-A MTC5Q03897 1148 aa5.4□□□□□ -1.54
YSF3YNL138W-A PUS1Q12211 544 aaKnown RBP5.4□□□□□ -1.54
YSF3YNL138W-A YPR053CQ6Q5F3 151 aa5.4□□□□□ -1.54
YSF3YNL138W-A PRE9P23638 258 aaKnown RBP5.39□□□□□ -1.55
YSF3YNL138W-A MSH3P25336 1018 aa5.39□□□□□ -1.55
YSF3YNL138W-A SQT1P35184 431 aa5.39□□□□□ -1.55
YSF3YNL138W-A MAE1P36013 669 aaKnown RBP5.39□□□□□ -1.55
YSF3YNL138W-A YKL077WP36081 392 aa5.39□□□□□ -1.55
YSF3YNL138W-A EXO5P38289 585 aa5.39□□□□□ -1.55
YSF3YNL138W-A PEX28P38848 579 aa5.39□□□□□ -1.55
YSF3YNL138W-A MRPS18P42847 217 aa5.39□□□□□ -1.55
YSF3YNL138W-A SNU71P53207 620 aaKnown RBP5.39□□□□□ -1.55
YSF3YNL138W-A NOG1Q02892 647 aaKnown RBP5.39□□□□□ -1.55
YSF3YNL138W-A YMR074CQ04773 145 aa5.39□□□□□ -1.55
YSF3YNL138W-A YIG1Q08956 461 aa5.39□□□□□ -1.55
YSF3YNL138W-A TY1A-NL1Q12391 440 aaKnown RBP5.39□□□□□ -1.55
YSF3YNL138W-A SHU2P38957 223 aa5.38□□□□□ -1.55
YSF3YNL138W-A KIP3P53086 805 aaKnown RBP5.38□□□□□ -1.55
YSF3YNL138W-A MCD1Q12158 566 aa5.38□□□□□ -1.55
YSF3YNL138W-A AI3P03877 415 aa5.37□□□□□ -1.55
YSF3YNL138W-A SLS1P42900 643 aa5.37□□□□□ -1.55
YSF3YNL138W-A MEC3Q02574 474 aa5.37□□□□□ -1.55
YSF3YNL138W-A SFA1P32771 386 aa5.36□□□□□ -1.55
YSF3YNL138W-A TAT1P38085 619 aa5.36□□□□□ -1.55
YSF3YNL138W-A NEM1P38757 446 aa5.36□□□□□ -1.55
YSF3YNL138W-A SKN7P38889 622 aa5.36□□□□□ -1.55
YSF3YNL138W-A YGL140CP53120 1219 aa5.36□□□□□ -1.55
YSF3YNL138W-A FAR11P53917 953 aa5.36□□□□□ -1.55
YSF3YNL138W-A ESF1Q06344 628 aaKnown RBP5.36□□□□□ -1.55
YSF3YNL138W-A MCA1Q08601 432 aa5.36□□□□□ -1.55
YSF3YNL138W-A ALG6Q12001 544 aaKnown RBP5.36□□□□□ -1.55
YSF3YNL138W-A SEC7P11075 2009 aaKnown RBP5.35□□□□□ -1.55
YSF3YNL138W-A TY1B-NL2Q99337 1749 aaKnown RBP5.35□□□□□ -1.55
YSF3YNL138W-A STH1P32597 1359 aa5.35□□□□□ -1.55
YSF3YNL138W-A HEM13P11353 328 aaKnown RBP5.35□□□□□ -1.55
YSF3YNL138W-A REI1P38344 393 aaPredicted RBP5.35□□□□□ -1.55
YSF3YNL138W-A XKS1P42826 600 aa5.35□□□□□ -1.55
YSF3YNL138W-A GCV1P48015 400 aa5.35□□□□□ -1.55
YSF3YNL138W-A NCE103P53615 221 aa5.35□□□□□ -1.55
YSF3YNL138W-A RSC6P25632 483 aa5.34□□□□□ -1.55
YSF3YNL138W-A PAM1P37304 830 aaKnown RBP5.34□□□□□ -1.55
YSF3YNL138W-A REC8Q12188 680 aa5.34□□□□□ -1.55
YSF3YNL138W-A YBT1P32386 1661 aa5.34□□□□□ -1.56
YSF3YNL138W-A ARI1P53111 347 aaKnown RBP5.33□□□□□ -1.56
YSF3YNL138W-A RMD1Q03441 430 aa5.33□□□□□ -1.56
YSF3YNL138W-A UTP5Q04177 643 aaKnown RBP5.33□□□□□ -1.56
YSF3YNL138W-A YOR223WQ12015 292 aa5.33□□□□□ -1.56
YSF3YNL138W-A NUP188P52593 1655 aaKnown RBP5.33□□□□□ -1.56
YSF3YNL138W-A GCR1P07261 785 aa5.32□□□□□ -1.56
YSF3YNL138W-A SEC23P15303 768 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms