RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C RIC1P40395 1056 aa6.06□□□□□ -1.44
VBA1YMR088C INP52P50942 1183 aa6.06□□□□□ -1.44
VBA1YMR088C LSC1P53598 329 aaKnown RBP6.06□□□□□ -1.44
VBA1YMR088C OYE2Q03558 400 aaKnown RBP6.06□□□□□ -1.44
VBA1YMR088C SAS4Q04003 481 aa6.06□□□□□ -1.44
VBA1YMR088C VMS1Q04311 632 aaKnown RBP6.06□□□□□ -1.44
VBA1YMR088C GYP1Q08484 637 aa6.06□□□□□ -1.44
VBA1YMR088C RRP36Q12481 300 aaPredicted RBP6.06□□□□□ -1.44
VBA1YMR088C RTC1Q08281 1341 aa6.06□□□□□ -1.44
VBA1YMR088C TUF1P02992 437 aaKnown RBP6.05□□□□□ -1.44
VBA1YMR088C THS1P04801 734 aaKnown RBP6.05□□□□□ -1.44
VBA1YMR088C TRX2P22803 104 aaKnown RBP6.05□□□□□ -1.44
VBA1YMR088C CDC48P25694 835 aaKnown RBP6.05□□□□□ -1.44
VBA1YMR088C PAP1P29468 568 aaKnown RBP6.05□□□□□ -1.44
VBA1YMR088C ISF1P32488 338 aa6.05□□□□□ -1.44
VBA1YMR088C APE4P38821 490 aa6.05□□□□□ -1.44
VBA1YMR088C PEX18P38855 283 aa6.05□□□□□ -1.44
VBA1YMR088C FIG4P42837 879 aa6.05□□□□□ -1.44
VBA1YMR088C SRB7P47822 140 aa6.05□□□□□ -1.44
VBA1YMR088C YOL087CQ99247 1116 aa6.05□□□□□ -1.44
VBA1YMR088C SWI1P09547 1314 aa6.05□□□□□ -1.44
VBA1YMR088C EDE1P34216 1381 aa6.05□□□□□ -1.44
VBA1YMR088C RPB2P08518 1224 aaKnown RBP6.04□□□□□ -1.44
VBA1YMR088C TEC1P18412 486 aa6.04□□□□□ -1.44
VBA1YMR088C ACE2P21192 770 aa6.04□□□□□ -1.44
VBA1YMR088C HXT10P43581 546 aa6.04□□□□□ -1.44
VBA1YMR088C ARO80Q04052 950 aa6.04□□□□□ -1.44
VBA1YMR088C RAD33Q04231 177 aa6.04□□□□□ -1.44
VBA1YMR088C DPH6Q12429 685 aa6.04□□□□□ -1.44
VBA1YMR088C FOB1O13329 566 aa6.04□□□□□ -1.44
VBA1YMR088C RDS2P19541 446 aaKnown RBP6.04□□□□□ -1.44
VBA1YMR088C MEF1P25039 761 aa6.04□□□□□ -1.44
VBA1YMR088C AAD3P25612 363 aa6.04□□□□□ -1.44
VBA1YMR088C TPD3P31383 635 aa6.04□□□□□ -1.44
VBA1YMR088C CCL1P37366 393 aa6.04□□□□□ -1.44
VBA1YMR088C GRX7P38068 203 aa6.04□□□□□ -1.44
VBA1YMR088C SPR3P41901 512 aa6.04□□□□□ -1.44
VBA1YMR088C EMP47P43555 445 aa6.04□□□□□ -1.44
VBA1YMR088C DCP2P53550 970 aaKnown RBP6.04□□□□□ -1.44
VBA1YMR088C LEU1P07264 779 aaKnown RBP6.03□□□□□ -1.44
VBA1YMR088C MOD5P07884 428 aa6.03□□□□□ -1.44
VBA1YMR088C HOM3P10869 527 aa6.03□□□□□ -1.44
VBA1YMR088C PTR2P32901 601 aa6.03□□□□□ -1.44
VBA1YMR088C ABZ1P37254 787 aaPredicted RBP6.03□□□□□ -1.44
VBA1YMR088C RRD1P40454 393 aaKnown RBP6.03□□□□□ -1.44
VBA1YMR088C ALG2P43636 503 aa6.03□□□□□ -1.44
VBA1YMR088C DAS1P47005 663 aa6.03□□□□□ -1.44
VBA1YMR088C SHE10P53075 577 aa6.03□□□□□ -1.44
VBA1YMR088C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
VBA1YMR088C ECM11Q04110 302 aa6.03□□□□□ -1.44
VBA1YMR088C YPR084WQ06821 456 aa6.03□□□□□ -1.44
VBA1YMR088C NOB1Q08444 459 aaKnown RBP6.03□□□□□ -1.44
VBA1YMR088C MYO4P32492 1471 aa6.03□□□□□ -1.44
VBA1YMR088C TOM70P07213 617 aaKnown RBP6.02□□□□□ -1.45
VBA1YMR088C SPS1P08458 490 aa6.02□□□□□ -1.45
VBA1YMR088C SLA1P32790 1244 aa6.02□□□□□ -1.45
VBA1YMR088C SMY2P32909 740 aaKnown RBP6.02□□□□□ -1.45
VBA1YMR088C BCK2P33306 851 aa6.02□□□□□ -1.45
VBA1YMR088C NUP120P35729 1037 aa6.02□□□□□ -1.45
VBA1YMR088C APL2P36000 726 aaPredicted RBP6.02□□□□□ -1.45
VBA1YMR088C SLX1P38324 304 aa6.02□□□□□ -1.45
VBA1YMR088C HSE1P38753 452 aa6.02□□□□□ -1.45
VBA1YMR088C STN1P38960 494 aa6.02□□□□□ -1.45
VBA1YMR088C ACF4P47129 309 aa6.02□□□□□ -1.45
VBA1YMR088C YGR016WP53209 190 aa6.02□□□□□ -1.45
VBA1YMR088C SWA2Q06677 668 aa6.02□□□□□ -1.45
VBA1YMR088C FRA1Q07825 749 aa6.02□□□□□ -1.45
VBA1YMR088C DNL4Q08387 944 aaPredicted RBP6.02□□□□□ -1.45
VBA1YMR088C YPL277CQ08989 487 aa6.02□□□□□ -1.45
VBA1YMR088C ECM5Q03214 1411 aa6.01□□□□□ -1.45
VBA1YMR088C RAD9P14737 1309 aa6.01□□□□□ -1.45
VBA1YMR088C POL4P25615 582 aa6.01□□□□□ -1.45
VBA1YMR088C SWC3P31376 625 aa6.01□□□□□ -1.45
VBA1YMR088C GUT2P32191 649 aa6.01□□□□□ -1.45
VBA1YMR088C PPG1P32838 368 aa6.01□□□□□ -1.45
VBA1YMR088C YBL028CP38202 106 aa6.01□□□□□ -1.45
VBA1YMR088C GLO3P38682 493 aaKnown RBP6.01□□□□□ -1.45
VBA1YMR088C CAJ1P39101 391 aa6.01□□□□□ -1.45
VBA1YMR088C SAP1P39955 897 aaKnown RBP6.01□□□□□ -1.45
VBA1YMR088C GCD10P41814 478 aa6.01□□□□□ -1.45
VBA1YMR088C SEN54Q02825 467 aaPredicted RBP6.01□□□□□ -1.45
VBA1YMR088C STE20Q03497 939 aaKnown RBP6.01□□□□□ -1.45
VBA1YMR088C UBX2Q04228 584 aa6.01□□□□□ -1.45
VBA1YMR088C AOS1Q06624 347 aa6.01□□□□□ -1.45
VBA1YMR088C GIC2Q06648 383 aa6.01□□□□□ -1.45
VBA1YMR088C YPL191CQ08930 360 aa6.01□□□□□ -1.45
VBA1YMR088C ENT1Q12518 454 aa6.01□□□□□ -1.45
VBA1YMR088C RTP1Q12751 981 aa6.01□□□□□ -1.45
VBA1YMR088C PUP1P25043 261 aa6.01□□□□□ -1.45
VBA1YMR088C GRX4P32642 244 aa6.01□□□□□ -1.45
VBA1YMR088C MIA40P36046 403 aa6.01□□□□□ -1.45
VBA1YMR088C DOT6P40059 670 aaKnown RBP6.01□□□□□ -1.45
VBA1YMR088C TMN3P40071 706 aa6.01□□□□□ -1.45
VBA1YMR088C MAD1P40957 749 aa6.01□□□□□ -1.45
VBA1YMR088C ZDS2P54786 942 aa6.01□□□□□ -1.45
VBA1YMR088C ADA2Q02336 434 aa6.01□□□□□ -1.45
VBA1YMR088C MDM36Q06820 579 aa6.01□□□□□ -1.45
VBA1YMR088C RKM1Q08961 583 aaPredicted RBP6.01□□□□□ -1.45
VBA1YMR088C DPS1P04802 557 aaKnown RBP6□□□□□ -1.45
VBA1YMR088C RED1P14291 827 aa6□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms