RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C MOT2P34909 587 aaKnown RBP8.77□□□□□ -1.01
ATG17YLR423C NEM1P38757 446 aa8.77□□□□□ -1.01
ATG17YLR423C SNF7P39929 240 aaKnown RBP8.77□□□□□ -1.01
ATG17YLR423C CHZ1P40019 153 aaPredicted RBP8.77□□□□□ -1.01
ATG17YLR423C GIP2P40036 548 aa8.77□□□□□ -1.01
ATG17YLR423C NUP82P40368 713 aa8.77□□□□□ -1.01
ATG17YLR423C SHE9Q04172 456 aa8.77□□□□□ -1.01
ATG17YLR423C UTP5Q04177 643 aaKnown RBP8.77□□□□□ -1.01
ATG17YLR423C ESC2Q06340 456 aa8.77□□□□□ -1.01
ATG17YLR423C VBA5P36172 582 aa8.76□□□□□ -1.01
ATG17YLR423C SEA4P38164 1038 aa8.76□□□□□ -1.01
ATG17YLR423C IRR1P40541 1150 aa8.76□□□□□ -1.01
ATG17YLR423C YNR063WP53749 607 aa8.76□□□□□ -1.01
ATG17YLR423C YMR074CQ04773 145 aa8.76□□□□□ -1.01
ATG17YLR423C HSP60P19882 572 aaKnown RBP8.75□□□□□ -1.01
ATG17YLR423C ARL1P38116 183 aaKnown RBP8.75□□□□□ -1.01
ATG17YLR423C MCM7P38132 845 aa8.75□□□□□ -1.01
ATG17YLR423C ACO2P39533 789 aa8.75□□□□□ -1.01
ATG17YLR423C GAL11P19659 1081 aa8.74□□□□□ -1.01
ATG17YLR423C REI1P38344 393 aaPredicted RBP8.74□□□□□ -1.01
ATG17YLR423C PAN5P38787 379 aa8.74□□□□□ -1.01
ATG17YLR423C GCV1P48015 400 aa8.74□□□□□ -1.01
ATG17YLR423C TIF35Q04067 274 aaKnown RBP8.74□□□□□ -1.01
ATG17YLR423C YLL054CQ12244 843 aa8.74□□□□□ -1.01
ATG17YLR423C PHO8P11491 566 aa8.73□□□□□ -1.01
ATG17YLR423C PDC5P16467 563 aaKnown RBP8.73□□□□□ -1.01
ATG17YLR423C ARE1P25628 610 aa8.73□□□□□ -1.01
ATG17YLR423C TIM23P32897 222 aa8.73□□□□□ -1.01
ATG17YLR423C STE5P32917 917 aa8.73□□□□□ -1.01
ATG17YLR423C YKL107WP34251 309 aa8.73□□□□□ -1.01
ATG17YLR423C PBY1P38254 753 aa8.73□□□□□ -1.01
ATG17YLR423C RSP5P39940 809 aaKnown RBP8.73□□□□□ -1.01
ATG17YLR423C TED1P40533 473 aa8.73□□□□□ -1.01
ATG17YLR423C CNN1P43618 361 aa8.73□□□□□ -1.01
ATG17YLR423C ERP6P53198 216 aa8.73□□□□□ -1.01
ATG17YLR423C MEC3Q02574 474 aa8.73□□□□□ -1.01
ATG17YLR423C RAT1Q02792 1006 aaKnown RBP8.73□□□□□ -1.01
ATG17YLR423C POB3Q04636 552 aaKnown RBP8.73□□□□□ -1.01
ATG17YLR423C EAF1Q06337 982 aa8.73□□□□□ -1.01
ATG17YLR423C SLP1Q12232 587 aa8.73□□□□□ -1.01
ATG17YLR423C RKM4Q12504 494 aa8.73□□□□□ -1.01
ATG17YLR423C SAC7P17121 654 aa8.72□□□□□ -1.01
ATG17YLR423C RPL8BP29453 256 aaKnown RBP8.72□□□□□ -1.01
ATG17YLR423C KNS1P32350 737 aaPredicted RBP8.72□□□□□ -1.01
ATG17YLR423C ALG14P38242 237 aa8.72□□□□□ -1.01
ATG17YLR423C YHR020WP38708 688 aaKnown RBP8.72□□□□□ -1.01
ATG17YLR423C GGA2P38817 585 aaKnown RBP8.72□□□□□ -1.01
ATG17YLR423C FAR11P53917 953 aa8.72□□□□□ -1.01
ATG17YLR423C RKM2Q03942 479 aa8.72□□□□□ -1.01
ATG17YLR423C AVO1Q08236 1176 aa8.72□□□□□ -1.01
ATG17YLR423C LAP2Q10740 671 aa8.72□□□□□ -1.01
ATG17YLR423C YLR125WQ12138 136 aa8.72□□□□□ -1.01
ATG17YLR423C SBP1P10080 294 aaKnown RBP8.71□□□□□ -1.02
ATG17YLR423C DBP5P20449 482 aaKnown RBP8.71□□□□□ -1.02
ATG17YLR423C PIN4P34217 668 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
ATG17YLR423C GIS4Q04233 774 aa8.71□□□□□ -1.02
ATG17YLR423C AOS1Q06624 347 aa8.71□□□□□ -1.02
ATG17YLR423C FMP25Q08023 583 aa8.71□□□□□ -1.02
ATG17YLR423C CIT1P00890 479 aa8.7□□□□□ -1.02
ATG17YLR423C PRP9P19736 530 aaKnown RBP8.7□□□□□ -1.02
ATG17YLR423C PUF4P25339 888 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
ATG17YLR423C HUL4P40985 892 aa8.7□□□□□ -1.02
ATG17YLR423C YGL176CP46945 554 aa8.7□□□□□ -1.02
ATG17YLR423C PPM2Q08282 695 aa8.7□□□□□ -1.02
ATG17YLR423C GPM1P00950 247 aaKnown RBP8.69□□□□□ -1.02
ATG17YLR423C NAR1P23503 491 aaKnown RBP8.69□□□□□ -1.02
ATG17YLR423C PGM2P37012 569 aaKnown RBP8.69□□□□□ -1.02
ATG17YLR423C HSE1P38753 452 aa8.69□□□□□ -1.02
ATG17YLR423C SPO74P45819 413 aa8.69□□□□□ -1.02
ATG17YLR423C HNT2P49775 206 aa8.69□□□□□ -1.02
ATG17YLR423C ELG1Q12050 791 aa8.69□□□□□ -1.02
ATG17YLR423C GAR1P28007 205 aaKnown RBP8.68□□□□□ -1.02
ATG17YLR423C THI4P32318 326 aa8.68□□□□□ -1.02
ATG17YLR423C YAR028WP39548 234 aa8.68□□□□□ -1.02
ATG17YLR423C ALG6Q12001 544 aaKnown RBP8.68□□□□□ -1.02
ATG17YLR423C PTC5Q12511 572 aa8.68□□□□□ -1.02
ATG17YLR423C ALG3P38179 458 aa8.67□□□□□ -1.02
ATG17YLR423C MNN1P39106 762 aa8.67□□□□□ -1.02
ATG17YLR423C POL5P39985 1022 aaKnown RBP8.67□□□□□ -1.02
ATG17YLR423C ALR2P43553 858 aa8.67□□□□□ -1.02
ATG17YLR423C MAE1P36013 669 aaKnown RBP8.66□□□□□ -1.02
ATG17YLR423C UTP14Q04500 899 aaKnown RBP8.66□□□□□ -1.02
ATG17YLR423C YGR161W-CQ3E744 92 aa8.66□□□□□ -1.02
ATG17YLR423C NFS1P25374 497 aa8.65□□□□□ -1.02
ATG17YLR423C GBP2P25555 427 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
ATG17YLR423C MLS1P30952 554 aa8.65□□□□□ -1.02
ATG17YLR423C MBP1P39678 833 aa8.65□□□□□ -1.02
ATG17YLR423C PFD1P46988 109 aa8.65□□□□□ -1.02
ATG17YLR423C UBX5Q06682 500 aa8.65□□□□□ -1.02
ATG17YLR423C NHA1Q99271 985 aa8.65□□□□□ -1.02
ATG17YLR423C CAN1P04817 590 aa8.64□□□□□ -1.03
ATG17YLR423C AFG2P32794 780 aa8.64□□□□□ -1.03
ATG17YLR423C RGD1P38339 666 aa8.64□□□□□ -1.03
ATG17YLR423C VPS53P47061 822 aa8.64□□□□□ -1.03
ATG17YLR423C UTP8P53276 713 aaKnown RBP8.64□□□□□ -1.03
ATG17YLR423C YDL124WQ07551 312 aaKnown RBP8.64□□□□□ -1.03
ATG17YLR423C TY4B-PA0A0B7P3V8 1104 aa8.63□□□□□ -1.03
ATG17YLR423C ERR1P0CX10 437 aa8.63□□□□□ -1.03
ATG17YLR423C ERR2P0CX11 437 aa8.63□□□□□ -1.03
ATG17YLR423C ERS1P17261 260 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms