RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W TIM50Q02776 476 aa12.61□□□□□ -0.39
SIM1YIL123W GSC2P40989 1895 aa12.6□□□□□ -0.39
SIM1YIL123W RAD53P22216 821 aa12.6□□□□□ -0.39
SIM1YIL123W SEC20P28791 383 aa12.6□□□□□ -0.39
SIM1YIL123W GLC3P32775 704 aa12.6□□□□□ -0.39
SIM1YIL123W VPS45P38932 577 aa12.6□□□□□ -0.39
SIM1YIL123W VPS4P52917 437 aa12.6□□□□□ -0.39
SIM1YIL123W FPK1P53739 893 aa12.6□□□□□ -0.39
SIM1YIL123W TRS120Q04183 1289 aa12.6□□□□□ -0.39
SIM1YIL123W HIR1P32479 840 aa12.59□□□□□ -0.39
SIM1YIL123W SAC6P32599 642 aaKnown RBP12.59□□□□□ -0.39
SIM1YIL123W YGR117CP53270 476 aa12.59□□□□□ -0.39
SIM1YIL123W SMD2Q06217 110 aaKnown RBP12.59□□□□□ -0.39
SIM1YIL123W TFC8Q12308 588 aa12.59□□□□□ -0.39
SIM1YIL123W CDC15P27636 974 aa12.58□□□□□ -0.4
SIM1YIL123W SAS3P34218 831 aa12.58□□□□□ -0.4
SIM1YIL123W PSY4P38193 441 aa12.58□□□□□ -0.4
SIM1YIL123W UBP9P39967 754 aa12.58□□□□□ -0.4
SIM1YIL123W TPM2P40414 161 aa12.58□□□□□ -0.4
SIM1YIL123W ASE1P50275 885 aa12.58□□□□□ -0.4
SIM1YIL123W SLK19Q08581 821 aaKnown RBP12.58□□□□□ -0.4
SIM1YIL123W GAP1P19145 602 aaPredicted RBP12.57□□□□□ -0.4
SIM1YIL123W SAM2P19358 384 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W ADE17P38009 592 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W KEL1P38853 1164 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W YGR153WP48238 217 aa12.57□□□□□ -0.4
SIM1YIL123W BNI5P53890 448 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W HCR1Q05775 265 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W VIP1Q06685 1146 aaKnown RBP12.57□□□□□ -0.4
SIM1YIL123W THI6P41835 540 aa12.56□□□□□ -0.4
SIM1YIL123W SQS1P53866 767 aaKnown RBP12.56□□□□□ -0.4
SIM1YIL123W GFD1Q04839 188 aaKnown RBP12.56□□□□□ -0.4
SIM1YIL123W AFT2Q08957 416 aa12.56□□□□□ -0.4
SIM1YIL123W LAP2Q10740 671 aa12.56□□□□□ -0.4
SIM1YIL123W MYO1P08964 1928 aa12.56□□□□□ -0.4
SIM1YIL123W FOB1O13329 566 aa12.55□□□□□ -0.4
SIM1YIL123W RPL8AP17076 256 aaKnown RBP12.55□□□□□ -0.4
SIM1YIL123W HPR1P17629 752 aaKnown RBP12.55□□□□□ -0.4
SIM1YIL123W LSB1P53281 241 aa12.55□□□□□ -0.4
SIM1YIL123W DSE4P53753 1117 aa12.55□□□□□ -0.4
SIM1YIL123W CSM3Q04659 317 aa12.55□□□□□ -0.4
SIM1YIL123W ESC2Q06340 456 aa12.55□□□□□ -0.4
SIM1YIL123W TMA16Q08687 178 aa12.55□□□□□ -0.4
SIM1YIL123W TUB2P02557 457 aaKnown RBP12.54□□□□□ -0.4
SIM1YIL123W TIF4631P39935 952 aaKnown RBP12.54□□□□□ -0.4
SIM1YIL123W FET4P40988 552 aa12.54□□□□□ -0.4
SIM1YIL123W UBA2P52488 636 aa12.54□□□□□ -0.4
SIM1YIL123W SDA1P53313 767 aaKnown RBP12.54□□□□□ -0.4
SIM1YIL123W PSR2Q07949 397 aa12.54□□□□□ -0.4
SIM1YIL123W TUF1P02992 437 aaKnown RBP12.54□□□□□ -0.4
SIM1YIL123W BCD1P38772 366 aa12.54□□□□□ -0.4
SIM1YIL123W NIT1P40447 199 aa12.54□□□□□ -0.4
SIM1YIL123W VTC2P43585 828 aa12.54□□□□□ -0.4
SIM1YIL123W CIT3P43635 486 aa12.54□□□□□ -0.4
SIM1YIL123W STU2P46675 888 aa12.54□□□□□ -0.4
SIM1YIL123W CBP1P07252 654 aa12.53□□□□□ -0.4
SIM1YIL123W SRO9P25567 434 aaKnown RBP12.53□□□□□ -0.4
SIM1YIL123W MNN4P36044 1178 aa12.53□□□□□ -0.4
SIM1YIL123W ATG32P40458 529 aa12.53□□□□□ -0.4
SIM1YIL123W SPC110P32380 944 aa12.52□□□□□ -0.41
SIM1YIL123W SOL4P53315 255 aa12.52□□□□□ -0.41
SIM1YIL123W VPS75P53853 264 aa12.52□□□□□ -0.41
SIM1YIL123W SUE1Q06524 206 aa12.52□□□□□ -0.41
SIM1YIL123W CKA2P19454 339 aa12.51□□□□□ -0.41
SIM1YIL123W SLI15P38283 698 aa12.51□□□□□ -0.41
SIM1YIL123W UTP4Q06679 776 aaKnown RBP12.51□□□□□ -0.41
SIM1YIL123W ERG12P07277 443 aa12.5□□□□□ -0.41
SIM1YIL123W PWP2P25635 923 aaKnown RBP12.5□□□□□ -0.41
SIM1YIL123W PXL1P36166 706 aa12.5□□□□□ -0.41
SIM1YIL123W PAN5P38787 379 aa12.5□□□□□ -0.41
SIM1YIL123W EMP47P43555 445 aa12.5□□□□□ -0.41
SIM1YIL123W YGR237CP50089 785 aa12.5□□□□□ -0.41
SIM1YIL123W PHO13P19881 312 aa12.49□□□□□ -0.41
SIM1YIL123W SAP190P36123 1033 aa12.49□□□□□ -0.41
SIM1YIL123W PET10P36139 283 aa12.49□□□□□ -0.41
SIM1YIL123W TPS3P38426 1054 aaKnown RBP12.49□□□□□ -0.41
SIM1YIL123W YLR278CQ05854 1341 aa12.48□□□□□ -0.41
SIM1YIL123W RTG2P32608 588 aaKnown RBP12.48□□□□□ -0.41
SIM1YIL123W MNR2P35724 969 aa12.48□□□□□ -0.41
SIM1YIL123W ERG7P38604 731 aa12.48□□□□□ -0.41
SIM1YIL123W STR2P47164 639 aa12.48□□□□□ -0.41
SIM1YIL123W BUL2Q03758 920 aaKnown RBP12.48□□□□□ -0.41
SIM1YIL123W ADY4Q05955 493 aa12.48□□□□□ -0.41
SIM1YIL123W SMC6Q12749 1114 aa12.48□□□□□ -0.41
SIM1YIL123W CDC37P06101 506 aaKnown RBP12.47□□□□□ -0.41
SIM1YIL123W MIP1P15801 1254 aa12.47□□□□□ -0.41
SIM1YIL123W MFT1P33441 392 aaKnown RBP12.47□□□□□ -0.41
SIM1YIL123W YET1P35723 206 aa12.47□□□□□ -0.41
SIM1YIL123W GAA1P39012 614 aa12.47□□□□□ -0.41
SIM1YIL123W MGA2P40578 1113 aa12.47□□□□□ -0.41
SIM1YIL123W ROG3P43602 733 aa12.47□□□□□ -0.41
SIM1YIL123W AIP1P46680 615 aaKnown RBP12.47□□□□□ -0.41
SIM1YIL123W CBK1P53894 756 aa12.47□□□□□ -0.41
SIM1YIL123W EBS1Q03466 884 aaKnown RBP12.47□□□□□ -0.41
SIM1YIL123W AIM33Q04516 312 aa12.47□□□□□ -0.41
SIM1YIL123W SPP382Q06411 708 aaPredicted RBP12.47□□□□□ -0.41
SIM1YIL123W AIM7Q12156 149 aa12.47□□□□□ -0.41
SIM1YIL123W CSR2Q12734 1121 aa12.47□□□□□ -0.41
SIM1YIL123W PDC1P06169 563 aaKnown RBP12.46□□□□□ -0.41
SIM1YIL123W GAL2P13181 574 aa12.46□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms