RNA–Protein interactions for RNA: YIL072W

HOP1, Transcript of Meiosis-specific protein required for chromosome synapsis, yeast

Gene HOP1, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOP1	YIL072W	GCR1	P07261	785 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	CDC34	P14682	295 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	YKL091C	P33324	310 aa	Known RBP	4.11	□□□□□ -1.75
HOP1	YIL072W	SQT1	P35184	431 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	PEX28	P38848	579 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	LSB3	P43603	459 aa	Known RBP	4.11	□□□□□ -1.75
HOP1	YIL072W	RSM26	P47141	266 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	YGL140C	P53120	1219 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	YGR053C	P53234	283 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	BDF2	Q07442	638 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	GAS5	Q08193	484 aa		4.11	□□□□□ -1.75
HOP1	YIL072W	GRX1	P25373	110 aa	Known RBP	4.1	□□□□□ -1.75
HOP1	YIL072W	REI1	P38344	393 aa	Predicted RBP	4.1	□□□□□ -1.75
HOP1	YIL072W	YJL049W	P47048	450 aa		4.1	□□□□□ -1.75
HOP1	YIL072W	KIP3	P53086	805 aa	Known RBP	4.1	□□□□□ -1.75
HOP1	YIL072W	GDE1	Q02979	1223 aa		4.1	□□□□□ -1.75
HOP1	YIL072W	UTP5	Q04177	643 aa	Known RBP	4.1	□□□□□ -1.75
HOP1	YIL072W	YOR059C	Q08448	450 aa	Known RBP	4.1	□□□□□ -1.75
HOP1	YIL072W	HXT13	P39924	564 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	ALT1	P52893	592 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	HXT17	P53631	564 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	CWC24	P53769	259 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	SIW14	P53965	281 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	HXT15	P54854	567 aa		4.09	□□□□□ -1.75
HOP1	YIL072W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
HOP1	YIL072W	SMY2	P32909	740 aa	Known RBP	4.09	□□□□□ -1.76
HOP1	YIL072W	NNK1	P36003	928 aa		4.09	□□□□□ -1.76
HOP1	YIL072W	YKL069W	P36088	180 aa		4.09	□□□□□ -1.76
HOP1	YIL072W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
HOP1	YIL072W	ALG12	P53730	551 aa		4.09	□□□□□ -1.76
HOP1	YIL072W	DOT1	Q04089	582 aa	Known RBP	4.09	□□□□□ -1.76
HOP1	YIL072W	YMR074C	Q04773	145 aa		4.09	□□□□□ -1.76
HOP1	YIL072W	MSB1	P21339	1137 aa	Known RBP	4.08	□□□□□ -1.76
HOP1	YIL072W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HOP1	YIL072W	YLR122C	Q12312	125 aa		4.08	□□□□□ -1.76
HOP1	YIL072W	PRI2	P20457	528 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	COQ2	P32378	372 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	PPG1	P32838	368 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	ADD66	P36040	267 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	HSE1	P38753	452 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	HUL5	P53119	910 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	EEB1	Q02891	456 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	HDA2	Q06629	674 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	GIC2	Q06648	383 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	OPI10	Q08202	246 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	PPM2	Q08282	695 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	MCA1	Q08601	432 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	CDC53	Q12018	815 aa	Known RBP	4.07	□□□□□ -1.76
HOP1	YIL072W	YAR028W	P39548	234 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	SPF1	P39986	1215 aa	Known RBP	4.07	□□□□□ -1.76
HOP1	YIL072W	MSH4	P40965	878 aa	Predicted RBP	4.07	□□□□□ -1.76
HOP1	YIL072W	SLS1	P42900	643 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	VPS53	P47061	822 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	YGR045C	P53229	120 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	PEX13	P80667	386 aa		4.07	□□□□□ -1.76
HOP1	YIL072W	CHS2	P14180	963 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	KAE1	P36132	386 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	GPT2	P36148	743 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	YHR020W	P38708	688 aa	Known RBP	4.06	□□□□□ -1.76
HOP1	YIL072W	XKS1	P42826	600 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	SPO74	P45819	413 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	RTT10	Q08924	1013 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	LAP2	Q10740	671 aa		4.06	□□□□□ -1.76
HOP1	YIL072W	RAD4	P14736	754 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	RRP14	P36080	434 aa	Known RBP	4.05	□□□□□ -1.76
HOP1	YIL072W	MMM1	P41800	426 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	CIT3	P43635	486 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	AVO1	Q08236	1176 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	HRK1	Q08732	759 aa	Known RBP	4.05	□□□□□ -1.76
HOP1	YIL072W	TMA46	Q12000	345 aa	Known RBP	4.05	□□□□□ -1.76
HOP1	YIL072W	STE5	P32917	917 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	EST2	Q06163	884 aa		4.05	□□□□□ -1.76
HOP1	YIL072W	TDA5	Q06417	326 aa	Known RBP	4.05	□□□□□ -1.76
HOP1	YIL072W	AKR1	P39010	764 aa		4.04	□□□□□ -1.76
HOP1	YIL072W	OSW7	P43611	510 aa		4.04	□□□□□ -1.76
HOP1	YIL072W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
HOP1	YIL072W	RSA3	Q05942	220 aa	Known RBP	4.04	□□□□□ -1.76
HOP1	YIL072W	AFG2	P32794	780 aa		4.03	□□□□□ -1.76
HOP1	YIL072W	RPN3	P40016	523 aa	Known RBP	4.03	□□□□□ -1.76
HOP1	YIL072W	TYW3	P53177	273 aa		4.03	□□□□□ -1.76
HOP1	YIL072W	ORC3	P54790	616 aa		4.03	□□□□□ -1.76
HOP1	YIL072W	MED7	Q08278	222 aa		4.03	□□□□□ -1.76
HOP1	YIL072W	RPS4A	P0CX35	261 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	RPS4B	P0CX36	261 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	NFS1	P25374	497 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	MKK2	P32491	506 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	RER2	P35196	286 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	ATG14	P38270	344 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	RGD1	P38339	666 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	QNS1	P38795	714 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	OYE3	P41816	400 aa	Predicted RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	NAN1	Q02931	896 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	MRL1	Q06815	381 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	YPL260W	Q08977	551 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	ALG6	Q12001	544 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	FAL1	Q12099	399 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	RET1	P22276	1149 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	SRO9	P25567	434 aa	Known RBP	4.02	□□□□□ -1.77
HOP1	YIL072W	TIM23	P32897	222 aa		4.02	□□□□□ -1.77
HOP1	YIL072W	NUP82	P40368	713 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms