RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W SPO71Q03868 1245 aa6.44□□□□□ -1.38
SKN1YGR143W CHS5Q12114 671 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W DBP10Q12389 995 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W ERP4Q12450 207 aa6.44□□□□□ -1.38
SKN1YGR143W YIL002W-AQ3E7Z5 69 aa6.44□□□□□ -1.38
SKN1YGR143W SWC3P31376 625 aa6.44□□□□□ -1.38
SKN1YGR143W NTH2P35172 780 aa6.44□□□□□ -1.38
SKN1YGR143W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
SKN1YGR143W NUP120P35729 1037 aa6.44□□□□□ -1.38
SKN1YGR143W MIC60P36112 540 aa6.44□□□□□ -1.38
SKN1YGR143W ETP1P38748 585 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W NOC2P39744 710 aaKnown RBP6.44□□□□□ -1.38
SKN1YGR143W BUG1Q12191 341 aa6.44□□□□□ -1.38
SKN1YGR143W VMA4P22203 233 aaKnown RBP6.43□□□□□ -1.38
SKN1YGR143W MRE11P32829 692 aa6.43□□□□□ -1.38
SKN1YGR143W SLX8P40072 274 aa6.43□□□□□ -1.38
SKN1YGR143W UTP18P40362 594 aaPredicted RBP6.43□□□□□ -1.38
SKN1YGR143W SDA1P53313 767 aaKnown RBP6.43□□□□□ -1.38
SKN1YGR143W SWI1P09547 1314 aa6.43□□□□□ -1.38
SKN1YGR143W SSK22P25390 1331 aaPredicted RBP6.43□□□□□ -1.38
SKN1YGR143W SLD2P34252 453 aa6.43□□□□□ -1.38
SKN1YGR143W TTI1P36097 1038 aa6.43□□□□□ -1.38
SKN1YGR143W MAL31P38156 614 aa6.43□□□□□ -1.38
SKN1YGR143W YTA6P40328 754 aa6.43□□□□□ -1.38
SKN1YGR143W SRP1Q02821 542 aaKnown RBP6.43□□□□□ -1.38
SKN1YGR143W GYL1Q04322 720 aa6.43□□□□□ -1.38
SKN1YGR143W ALE1Q08548 619 aa6.43□□□□□ -1.38
SKN1YGR143W CYC8P14922 966 aa6.42□□□□□ -1.38
SKN1YGR143W SEN2P16658 377 aa6.42□□□□□ -1.38
SKN1YGR143W TOS1P38288 455 aa6.42□□□□□ -1.38
SKN1YGR143W LAM5P43560 674 aa6.42□□□□□ -1.38
SKN1YGR143W PLP1Q04004 230 aa6.42□□□□□ -1.38
SKN1YGR143W TSR1Q07381 788 aaKnown RBP6.42□□□□□ -1.38
SKN1YGR143W RVB2Q12464 471 aaKnown RBP6.42□□□□□ -1.38
SKN1YGR143W RFC5P38251 354 aa6.42□□□□□ -1.38
SKN1YGR143W IOC3P43596 787 aa6.42□□□□□ -1.38
SKN1YGR143W PRP31P49704 494 aaPredicted RBP6.42□□□□□ -1.38
SKN1YGR143W SNZ1Q03148 297 aa6.42□□□□□ -1.38
SKN1YGR143W ARV1Q06541 321 aa6.42□□□□□ -1.38
SKN1YGR143W RIO1Q12196 484 aaKnown RBP6.42□□□□□ -1.38
SKN1YGR143W PET123P17558 318 aa6.41□□□□□ -1.38
SKN1YGR143W MEF2P39677 819 aa6.41□□□□□ -1.38
SKN1YGR143W FTR1P40088 404 aa6.41□□□□□ -1.38
SKN1YGR143W IES1P43579 692 aa6.41□□□□□ -1.38
SKN1YGR143W ALG2P43636 503 aa6.41□□□□□ -1.38
SKN1YGR143W SRB7P47822 140 aa6.41□□□□□ -1.38
SKN1YGR143W CSR1Q06705 408 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W BUD7Q08754 746 aa6.41□□□□□ -1.38
SKN1YGR143W LEU1P07264 779 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W CDC10P25342 322 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W KCC4P25389 1037 aa6.41□□□□□ -1.38
SKN1YGR143W PBY1P38254 753 aa6.41□□□□□ -1.38
SKN1YGR143W YER034WP40022 185 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W RSM25P40496 264 aa6.41□□□□□ -1.38
SKN1YGR143W EAF6P47128 113 aa6.41□□□□□ -1.38
SKN1YGR143W PEX21P50091 288 aa6.41□□□□□ -1.38
SKN1YGR143W HOP2P53187 214 aa6.41□□□□□ -1.38
SKN1YGR143W CAF130P53280 1122 aaPredicted RBP6.41□□□□□ -1.38
SKN1YGR143W LSC1P53598 329 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W ESF2P53743 316 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W ASI1P54074 624 aa6.41□□□□□ -1.38
SKN1YGR143W BET4Q00618 327 aa6.41□□□□□ -1.38
SKN1YGR143W HAP5Q02516 242 aa6.41□□□□□ -1.38
SKN1YGR143W TMA64Q04600 565 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W PHM6Q05637 104 aa6.41□□□□□ -1.38
SKN1YGR143W LCB5Q06147 687 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W VAM6Q07468 1049 aa6.41□□□□□ -1.38
SKN1YGR143W CMS1Q07897 291 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W YBL111CQ3E7Y5 667 aa6.41□□□□□ -1.38
SKN1YGR143W UTP10P42945 1769 aaKnown RBP6.41□□□□□ -1.38
SKN1YGR143W STE6P12866 1290 aa6.4□□□□□ -1.38
SKN1YGR143W APL2P36000 726 aaPredicted RBP6.4□□□□□ -1.38
SKN1YGR143W HEL1P36113 551 aa6.4□□□□□ -1.38
SKN1YGR143W HSM3P38348 480 aa6.4□□□□□ -1.38
SKN1YGR143W STN1P38960 494 aa6.4□□□□□ -1.38
SKN1YGR143W RTR1P40084 226 aaPredicted RBP6.4□□□□□ -1.38
SKN1YGR143W GCD10P41814 478 aa6.4□□□□□ -1.38
SKN1YGR143W ECL1P48235 211 aa6.4□□□□□ -1.38
SKN1YGR143W UTP22P53254 1237 aaPredicted RBP6.4□□□□□ -1.38
SKN1YGR143W RMT2Q03305 412 aa6.4□□□□□ -1.38
SKN1YGR143W NNT1Q05874 261 aa6.4□□□□□ -1.38
SKN1YGR143W SLK19Q08581 821 aaKnown RBP6.4□□□□□ -1.38
SKN1YGR143W CYB2P00175 591 aa6.39□□□□□ -1.39
SKN1YGR143W MRPL25P23369 157 aa6.39□□□□□ -1.39
SKN1YGR143W GCD14P46959 383 aaPredicted RBP6.39□□□□□ -1.39
SKN1YGR143W CWH41P53008 833 aa6.39□□□□□ -1.39
SKN1YGR143W DCP2P53550 970 aaKnown RBP6.39□□□□□ -1.39
SKN1YGR143W MMR1Q06324 491 aa6.39□□□□□ -1.39
SKN1YGR143W BDF2Q07442 638 aa6.39□□□□□ -1.39
SKN1YGR143W NYV1Q12255 253 aa6.39□□□□□ -1.39
SKN1YGR143W SUI3P09064 285 aaKnown RBP6.39□□□□□ -1.39
SKN1YGR143W NAT1P12945 854 aaKnown RBP6.39□□□□□ -1.39
SKN1YGR143W PRD1P25375 712 aa6.39□□□□□ -1.39
SKN1YGR143W SMY1P32364 656 aaKnown RBP6.39□□□□□ -1.39
SKN1YGR143W PPX1P38698 397 aa6.39□□□□□ -1.39
SKN1YGR143W SIP3P38717 1229 aa6.39□□□□□ -1.39
SKN1YGR143W TMN3P40071 706 aa6.39□□□□□ -1.39
SKN1YGR143W IML2P47031 731 aa6.39□□□□□ -1.39
SKN1YGR143W HPC2Q01448 625 aa6.39□□□□□ -1.39
SKN1YGR143W MDM1Q01846 1127 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms