RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W ERG12P07277 443 aa6.21□□□□□ -1.42
SHE10YGL228W YDJ1P25491 409 aaKnown RBP6.21□□□□□ -1.42
SHE10YGL228W MCM4P30665 933 aaKnown RBP6.21□□□□□ -1.42
SHE10YGL228W RPN12P32496 274 aa6.21□□□□□ -1.42
SHE10YGL228W PES4P39684 611 aa6.21□□□□□ -1.42
SHE10YGL228W YML037CQ03703 340 aa6.21□□□□□ -1.42
SHE10YGL228W AIM44Q99299 758 aa6.21□□□□□ -1.42
SHE10YGL228W CLC1P17891 233 aa6.2□□□□□ -1.42
SHE10YGL228W CCT3P39077 534 aaKnown RBP6.2□□□□□ -1.42
SHE10YGL228W EIS1Q05050 843 aaKnown RBP6.2□□□□□ -1.42
SHE10YGL228W VIP1Q06685 1146 aaKnown RBP6.2□□□□□ -1.42
SHE10YGL228W DDP1Q99321 188 aaKnown RBP6.2□□□□□ -1.42
SHE10YGL228W TRS33Q99394 268 aa6.2□□□□□ -1.42
SHE10YGL228W GPA1P08539 472 aa6.19□□□□□ -1.42
SHE10YGL228W ASF1P32447 279 aa6.19□□□□□ -1.42
SHE10YGL228W RFT1P38206 574 aaPredicted RBP6.19□□□□□ -1.42
SHE10YGL228W YER130CP39959 443 aa6.19□□□□□ -1.42
SHE10YGL228W RSM25P40496 264 aa6.19□□□□□ -1.42
SHE10YGL228W LYS14P40971 790 aa6.19□□□□□ -1.42
SHE10YGL228W CIT3P43635 486 aa6.19□□□□□ -1.42
SHE10YGL228W YJL007CP47080 104 aa6.19□□□□□ -1.42
SHE10YGL228W SOL4P53315 255 aa6.19□□□□□ -1.42
SHE10YGL228W VMS1Q04311 632 aaKnown RBP6.19□□□□□ -1.42
SHE10YGL228W CEX1Q12453 761 aa6.19□□□□□ -1.42
SHE10YGL228W RAD18P10862 487 aa6.19□□□□□ -1.42
SHE10YGL228W OCT1P35999 772 aa6.19□□□□□ -1.42
SHE10YGL228W PHO88P38264 188 aaPredicted RBP6.19□□□□□ -1.42
SHE10YGL228W LSB1P53281 241 aa6.19□□□□□ -1.42
SHE10YGL228W YGR273CP53329 174 aa6.19□□□□□ -1.42
SHE10YGL228W TRS120Q04183 1289 aa6.19□□□□□ -1.42
SHE10YGL228W YOR296WQ08748 1289 aa6.19□□□□□ -1.42
SHE10YGL228W NBL1Q3E7Y6 73 aa6.19□□□□□ -1.42
SHE10YGL228W PHR1P05066 565 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SHE10YGL228W SAM1P10659 382 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W THR4P16120 514 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W ALG1P16661 449 aa6.18□□□□□ -1.42
SHE10YGL228W RPL8AP17076 256 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W RKM3P38222 552 aa6.18□□□□□ -1.42
SHE10YGL228W NPR3P38742 1146 aa6.18□□□□□ -1.42
SHE10YGL228W STT3P39007 718 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W YPT11P48559 417 aa6.18□□□□□ -1.42
SHE10YGL228W FMS1P50264 508 aa6.18□□□□□ -1.42
SHE10YGL228W RRT6P53117 311 aaPredicted RBP6.18□□□□□ -1.42
SHE10YGL228W RET3P53600 189 aa6.18□□□□□ -1.42
SHE10YGL228W DSE4P53753 1117 aa6.18□□□□□ -1.42
SHE10YGL228W TMA64Q04600 565 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W UBX5Q06682 500 aa6.18□□□□□ -1.42
SHE10YGL228W SUB2Q07478 446 aaKnown RBP6.18□□□□□ -1.42
SHE10YGL228W OXR1Q08952 273 aa6.18□□□□□ -1.42
SHE10YGL228W TIP41Q12199 356 aa6.18□□□□□ -1.42
SHE10YGL228W SAS3P34218 831 aa6.17□□□□□ -1.42
SHE10YGL228W PCS60P38137 543 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SHE10YGL228W PAN5P38787 379 aa6.17□□□□□ -1.42
SHE10YGL228W TPM2P40414 161 aa6.17□□□□□ -1.42
SHE10YGL228W ATG32P40458 529 aa6.17□□□□□ -1.42
SHE10YGL228W YGR153WP48238 217 aa6.17□□□□□ -1.42
SHE10YGL228W CTR1P49573 406 aa6.17□□□□□ -1.42
SHE10YGL228W CUE3P53137 624 aaKnown RBP6.17□□□□□ -1.42
SHE10YGL228W RSC1P53236 928 aa6.17□□□□□ -1.42
SHE10YGL228W BNI5P53890 448 aaKnown RBP6.17□□□□□ -1.42
SHE10YGL228W FAR11P53917 953 aa6.17□□□□□ -1.42
SHE10YGL228W SSL2Q00578 843 aa6.17□□□□□ -1.42
SHE10YGL228W AIM33Q04516 312 aa6.17□□□□□ -1.42
SHE10YGL228W MMR1Q06324 491 aa6.17□□□□□ -1.42
SHE10YGL228W TYW1Q08960 810 aaKnown RBP6.17□□□□□ -1.42
SHE10YGL228W TFC8Q12308 588 aa6.17□□□□□ -1.42
SHE10YGL228W TUF1P02992 437 aaKnown RBP6.16□□□□□ -1.42
SHE10YGL228W MCM3P24279 971 aaKnown RBP6.16□□□□□ -1.42
SHE10YGL228W SRP40P32583 406 aaPredicted RBP6.16□□□□□ -1.42
SHE10YGL228W TGL1P34163 548 aa6.16□□□□□ -1.42
SHE10YGL228W SUL1P38359 859 aa6.16□□□□□ -1.42
SHE10YGL228W FYV10P40492 516 aa6.16□□□□□ -1.42
SHE10YGL228W SGD1Q06132 899 aa6.16□□□□□ -1.42
SHE10YGL228W SLK19Q08581 821 aaKnown RBP6.16□□□□□ -1.42
SHE10YGL228W HIS4P00815 799 aaKnown RBP6.16□□□□□ -1.42
SHE10YGL228W SEC20P28791 383 aa6.16□□□□□ -1.42
SHE10YGL228W SHP1P34223 423 aa6.16□□□□□ -1.42
SHE10YGL228W ORC6P38826 435 aa6.16□□□□□ -1.42
SHE10YGL228W GAA1P39012 614 aa6.16□□□□□ -1.42
SHE10YGL228W PSR2Q07949 397 aa6.16□□□□□ -1.42
SHE10YGL228W RKM4Q12504 494 aa6.16□□□□□ -1.42
SHE10YGL228W PER1P25625 357 aa6.15□□□□□ -1.42
SHE10YGL228W UGA4P32837 571 aa6.15□□□□□ -1.42
SHE10YGL228W IXR1P33417 597 aa6.15□□□□□ -1.42
SHE10YGL228W YKT6P36015 200 aaKnown RBP6.15□□□□□ -1.42
SHE10YGL228W SDA1P53313 767 aaKnown RBP6.15□□□□□ -1.42
SHE10YGL228W ADY4Q05955 493 aa6.15□□□□□ -1.42
SHE10YGL228W DUS3Q06053 668 aaKnown RBP6.15□□□□□ -1.42
SHE10YGL228W ILV1P00927 576 aaKnown RBP6.14□□□□□ -1.43
SHE10YGL228W HVG1P0CE11 249 aa6.14□□□□□ -1.43
SHE10YGL228W PWP2P25635 923 aaKnown RBP6.14□□□□□ -1.43
SHE10YGL228W CDC15P27636 974 aa6.14□□□□□ -1.43
SHE10YGL228W BMH1P29311 267 aaKnown RBP6.14□□□□□ -1.43
SHE10YGL228W UTR4P32626 227 aa6.14□□□□□ -1.43
SHE10YGL228W MCD4P36051 919 aa6.14□□□□□ -1.43
SHE10YGL228W VAB2P40003 282 aa6.14□□□□□ -1.43
SHE10YGL228W DAK2P43550 591 aa6.14□□□□□ -1.43
SHE10YGL228W ALD6P54115 500 aaKnown RBP6.14□□□□□ -1.43
SHE10YGL228W ORC4P54791 529 aa6.14□□□□□ -1.43
SHE10YGL228W CSM3Q04659 317 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms