RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C PDR3P33200 976 aa3.53□□□□□ -1.84
PRE4YFR050C YGR035CP53222 116 aa3.53□□□□□ -1.84
PRE4YFR050C MEC3Q02574 474 aa3.53□□□□□ -1.84
PRE4YFR050C YML083CQ04526 418 aa3.53□□□□□ -1.84
PRE4YFR050C SUB2Q07478 446 aaKnown RBP3.53□□□□□ -1.84
PRE4YFR050C NOB1Q08444 459 aaKnown RBP3.53□□□□□ -1.84
PRE4YFR050C SCD5P34758 872 aa3.52□□□□□ -1.85
PRE4YFR050C NAM8Q00539 523 aaKnown RBP3.52□□□□□ -1.85
PRE4YFR050C YMR265CQ03508 461 aaKnown RBP3.52□□□□□ -1.85
PRE4YFR050C IRC3Q06683 689 aa3.52□□□□□ -1.85
PRE4YFR050C PUN1Q06991 263 aa3.52□□□□□ -1.85
PRE4YFR050C Q0182Q9ZZW1 134 aa3.52□□□□□ -1.85
PRE4YFR050C CBP1P07252 654 aa3.51□□□□□ -1.85
PRE4YFR050C PDC6P26263 563 aaKnown RBP3.51□□□□□ -1.85
PRE4YFR050C MLF3P32047 452 aa3.51□□□□□ -1.85
PRE4YFR050C NGR1P32831 672 aaKnown RBP3.51□□□□□ -1.85
PRE4YFR050C SHM1P37292 490 aaPredicted RBP3.51□□□□□ -1.85
PRE4YFR050C CEM1P39525 442 aa3.51□□□□□ -1.85
PRE4YFR050C AFG3P39925 761 aa3.51□□□□□ -1.85
PRE4YFR050C CUZ1P53899 274 aa3.51□□□□□ -1.85
PRE4YFR050C PUF6Q04373 656 aaKnown RBP3.51□□□□□ -1.85
PRE4YFR050C PSH1Q12161 406 aa3.51□□□□□ -1.85
PRE4YFR050C YOR131CQ12486 218 aa3.51□□□□□ -1.85
PRE4YFR050C BEM2P39960 2167 aaKnown RBP3.51□□□□□ -1.85
PRE4YFR050C SEC16P48415 2195 aaKnown RBP3.51□□□□□ -1.85
PRE4YFR050C DIT1P21623 536 aa3.5□□□□□ -1.85
PRE4YFR050C AIM21P40563 679 aa3.5□□□□□ -1.85
PRE4YFR050C MTO1P53070 669 aa3.5□□□□□ -1.85
PRE4YFR050C YNL165WP53891 406 aa3.5□□□□□ -1.85
PRE4YFR050C HPF1Q05164 967 aa3.5□□□□□ -1.85
PRE4YFR050C CCP1P00431 361 aa3.49□□□□□ -1.85
PRE4YFR050C RPP1AP05318 106 aaPredicted RBP3.49□□□□□ -1.85
PRE4YFR050C HSP104P31539 908 aaKnown RBP3.49□□□□□ -1.85
PRE4YFR050C MRPL16P38064 232 aa3.49□□□□□ -1.85
PRE4YFR050C LYS5P50113 272 aa3.49□□□□□ -1.85
PRE4YFR050C KRE33P53914 1056 aaKnown RBP3.49□□□□□ -1.85
PRE4YFR050C RPS31P05759 152 aaKnown RBP3.48□□□□□ -1.85
PRE4YFR050C SRS2P12954 1174 aa3.48□□□□□ -1.85
PRE4YFR050C FPS1P23900 669 aa3.48□□□□□ -1.85
PRE4YFR050C ADE12P80210 433 aaKnown RBP3.48□□□□□ -1.85
PRE4YFR050C EAF1Q06337 982 aa3.48□□□□□ -1.85
PRE4YFR050C UTP4Q06679 776 aaKnown RBP3.48□□□□□ -1.85
PRE4YFR050C SUT2Q12286 268 aa3.48□□□□□ -1.85
PRE4YFR050C DPH6Q12429 685 aa3.48□□□□□ -1.85
PRE4YFR050C LEU1P07264 779 aaKnown RBP3.47□□□□□ -1.85
PRE4YFR050C TRK2P28584 889 aa3.47□□□□□ -1.85
PRE4YFR050C SUV3P32580 737 aa3.47□□□□□ -1.85
PRE4YFR050C HXT5P38695 592 aa3.47□□□□□ -1.85
PRE4YFR050C PNP1Q05788 311 aa3.47□□□□□ -1.85
PRE4YFR050C BDF2Q07442 638 aa3.47□□□□□ -1.85
PRE4YFR050C MDM20Q12387 796 aaKnown RBP3.47□□□□□ -1.85
PRE4YFR050C HKR1P41809 1802 aa3.47□□□□□ -1.85
PRE4YFR050C FUR4P05316 633 aaKnown RBP3.46□□□□□ -1.86
PRE4YFR050C LPD1P09624 499 aaKnown RBP3.46□□□□□ -1.86
PRE4YFR050C RGP1P16664 663 aa3.46□□□□□ -1.86
PRE4YFR050C ISC10P32645 267 aa3.46□□□□□ -1.86
PRE4YFR050C RRN6P32786 894 aa3.46□□□□□ -1.86
PRE4YFR050C KTR2P33550 425 aa3.46□□□□□ -1.86
PRE4YFR050C ERG7P38604 731 aa3.46□□□□□ -1.86
PRE4YFR050C QDR2P40474 542 aa3.46□□□□□ -1.86
PRE4YFR050C JJJ3P47138 172 aa3.46□□□□□ -1.86
PRE4YFR050C ATG1P53104 897 aa3.46□□□□□ -1.86
PRE4YFR050C BRE5P53741 515 aaKnown RBP3.46□□□□□ -1.86
PRE4YFR050C ECM16Q04217 1267 aaKnown RBP3.46□□□□□ -1.86
PRE4YFR050C MRPL33P20084 86 aa3.45□□□□□ -1.86
PRE4YFR050C KAP122P32767 1081 aa3.45□□□□□ -1.86
PRE4YFR050C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
PRE4YFR050C GEF1P37020 779 aa3.45□□□□□ -1.86
PRE4YFR050C YBR197CP38306 217 aa3.45□□□□□ -1.86
PRE4YFR050C DYS1P38791 387 aa3.45□□□□□ -1.86
PRE4YFR050C OYE3P41816 400 aaPredicted RBP3.45□□□□□ -1.86
PRE4YFR050C SYT1Q06836 1226 aa3.45□□□□□ -1.86
PRE4YFR050C SSM4P40318 1319 aa3.44□□□□□ -1.86
PRE4YFR050C VMA3P25515 160 aa3.44□□□□□ -1.86
PRE4YFR050C PPZ1P26570 692 aa3.44□□□□□ -1.86
PRE4YFR050C GRS1P38088 690 aaKnown RBP3.44□□□□□ -1.86
PRE4YFR050C NCL1P38205 684 aaKnown RBP3.44□□□□□ -1.86
PRE4YFR050C TPS3P38426 1054 aaKnown RBP3.44□□□□□ -1.86
PRE4YFR050C JHD1P40034 492 aa3.44□□□□□ -1.86
PRE4YFR050C CUS1Q02554 436 aaPredicted RBP3.44□□□□□ -1.86
PRE4YFR050C KAR5Q04746 504 aa3.44□□□□□ -1.86
PRE4YFR050C IRC10Q08118 586 aa3.44□□□□□ -1.86
PRE4YFR050C GAS5Q08193 484 aa3.44□□□□□ -1.86
PRE4YFR050C RSC8P43609 557 aaKnown RBP3.43□□□□□ -1.86
PRE4YFR050C MCM6P53091 1017 aaKnown RBP3.43□□□□□ -1.86
PRE4YFR050C MFB1Q04922 465 aa3.43□□□□□ -1.86
PRE4YFR050C CRF1Q04930 467 aa3.43□□□□□ -1.86
PRE4YFR050C OSM1P21375 501 aaKnown RBP3.42□□□□□ -1.86
PRE4YFR050C CDC3P32457 520 aaKnown RBP3.42□□□□□ -1.86
PRE4YFR050C APM2P38700 605 aa3.42□□□□□ -1.86
PRE4YFR050C SUT1P53032 299 aaKnown RBP3.42□□□□□ -1.86
PRE4YFR050C HEH2Q03281 663 aa3.42□□□□□ -1.86
PRE4YFR050C ICL2Q12031 575 aa3.42□□□□□ -1.86
PRE4YFR050C YML133CQ03099 1374 aa3.41□□□□□ -1.86
PRE4YFR050C AI1P03875 834 aa3.41□□□□□ -1.86
PRE4YFR050C RPS24AP0CX31 135 aaKnown RBP3.41□□□□□ -1.86
PRE4YFR050C RPS24BP0CX32 135 aaKnown RBP3.41□□□□□ -1.86
PRE4YFR050C RPC31P17890 251 aa3.41□□□□□ -1.86
PRE4YFR050C GIP1P38229 639 aa3.41□□□□□ -1.86
PRE4YFR050C YBR287WP38355 427 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms