RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C YBR197CP38306 217 aa1.71□□□□□ -2.14
UBP3YER151C YHL008CP38750 627 aa1.71□□□□□ -2.14
UBP3YER151C PAN5P38787 379 aa1.71□□□□□ -2.14
UBP3YER151C DYS1P38791 387 aa1.71□□□□□ -2.14
UBP3YER151C EMG1Q06287 252 aaKnown RBP1.71□□□□□ -2.14
UBP3YER151C CPS1P27614 576 aa1.71□□□□□ -2.14
UBP3YER151C THI80P35202 319 aa1.71□□□□□ -2.14
UBP3YER151C SIS2P36024 562 aa1.71□□□□□ -2.14
UBP3YER151C TTI1P36097 1038 aa1.71□□□□□ -2.14
UBP3YER151C ISW1P38144 1129 aa1.71□□□□□ -2.14
UBP3YER151C NOB1Q08444 459 aaKnown RBP1.71□□□□□ -2.14
UBP3YER151C MSN1P22148 382 aa1.7□□□□□ -2.14
UBP3YER151C PUP1P25043 261 aa1.7□□□□□ -2.14
UBP3YER151C KTR2P33550 425 aa1.7□□□□□ -2.14
UBP3YER151C KTR7P40504 517 aa1.7□□□□□ -2.14
UBP3YER151C TAF1P46677 1066 aa1.7□□□□□ -2.14
UBP3YER151C PPT1P53043 513 aa1.7□□□□□ -2.14
UBP3YER151C ALD3P54114 506 aa1.7□□□□□ -2.14
UBP3YER151C VAN1P23642 535 aa1.7□□□□□ -2.14
UBP3YER151C BOI1P38041 980 aaKnown RBP1.7□□□□□ -2.14
UBP3YER151C YNR065CP53751 1116 aa1.7□□□□□ -2.14
UBP3YER151C TAD3Q9URQ3 322 aa1.7□□□□□ -2.14
UBP3YER151C GCD1P09032 578 aaPredicted RBP1.69□□□□□ -2.14
UBP3YER151C ORC3P54790 616 aa1.69□□□□□ -2.14
UBP3YER151C CDA2Q06703 312 aa1.69□□□□□ -2.14
UBP3YER151C PNS1Q12412 539 aa1.69□□□□□ -2.14
UBP3YER151C WHI3P34761 661 aaKnown RBP1.69□□□□□ -2.14
UBP3YER151C LDH1P38139 375 aa1.69□□□□□ -2.14
UBP3YER151C YBR287WP38355 427 aa1.69□□□□□ -2.14
UBP3YER151C TY4B-JP47024 1803 aa1.69□□□□□ -2.14
UBP3YER151C HSP78P33416 811 aa1.68□□□□□ -2.14
UBP3YER151C TGL4P36165 910 aa1.68□□□□□ -2.14
UBP3YER151C MMM1P41800 426 aa1.68□□□□□ -2.14
UBP3YER151C BFA1P47113 574 aa1.68□□□□□ -2.14
UBP3YER151C CWH41P53008 833 aa1.68□□□□□ -2.14
UBP3YER151C ECM16Q04217 1267 aaKnown RBP1.68□□□□□ -2.14
UBP3YER151C YOR352WQ08816 343 aa1.68□□□□□ -2.14
UBP3YER151C TRS33Q99394 268 aa1.68□□□□□ -2.14
UBP3YER151C FUS1P11710 512 aa1.68□□□□□ -2.14
UBP3YER151C RGD2P43556 714 aa1.68□□□□□ -2.14
UBP3YER151C SPO71Q03868 1245 aa1.68□□□□□ -2.14
UBP3YER151C ELG1Q12050 791 aa1.68□□□□□ -2.14
UBP3YER151C APC11Q12157 165 aa1.68□□□□□ -2.14
UBP3YER151C TUB2P02557 457 aaKnown RBP1.68□□□□□ -2.14
UBP3YER151C ERS1P17261 260 aa1.68□□□□□ -2.14
UBP3YER151C ADP1P25371 1049 aa1.68□□□□□ -2.14
UBP3YER151C NEO1P40527 1151 aa1.68□□□□□ -2.14
UBP3YER151C CIT3P43635 486 aa1.68□□□□□ -2.14
UBP3YER151C FOL2P51601 243 aaKnown RBP1.68□□□□□ -2.14
UBP3YER151C RCM1P53972 490 aa1.68□□□□□ -2.14
UBP3YER151C ECM23Q02710 187 aa1.68□□□□□ -2.14
UBP3YER151C YML122CQ03207 126 aa1.68□□□□□ -2.14
UBP3YER151C HDA2Q06629 674 aa1.68□□□□□ -2.14
UBP3YER151C RAV1P47104 1357 aa1.67□□□□□ -2.14
UBP3YER151C YPT53P36019 220 aa1.67□□□□□ -2.14
UBP3YER151C NTA1P40354 457 aa1.67□□□□□ -2.14
UBP3YER151C ALD4P46367 519 aaKnown RBP1.67□□□□□ -2.14
UBP3YER151C YJR124CP47159 448 aa1.67□□□□□ -2.14
UBP3YER151C DUS1P53759 423 aaKnown RBP1.67□□□□□ -2.14
UBP3YER151C FAR11P53917 953 aa1.67□□□□□ -2.14
UBP3YER151C HAS1Q03532 505 aaKnown RBP1.67□□□□□ -2.14
UBP3YER151C GLO4Q12320 285 aa1.67□□□□□ -2.14
UBP3YER151C SSK22P25390 1331 aaPredicted RBP1.66□□□□□ -2.14
UBP3YER151C ISC10P32645 267 aa1.66□□□□□ -2.14
UBP3YER151C OYE3P41816 400 aaPredicted RBP1.66□□□□□ -2.14
UBP3YER151C YFL040WP43562 540 aa1.66□□□□□ -2.14
UBP3YER151C KIP3P53086 805 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C FMP30Q02883 468 aa1.66□□□□□ -2.14
UBP3YER151C SUB2Q07478 446 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C PRP6P19735 899 aaPredicted RBP1.66□□□□□ -2.14
UBP3YER151C FLR1P38124 548 aa1.66□□□□□ -2.14
UBP3YER151C RPL34BP40525 121 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C HXT8P40886 569 aa1.66□□□□□ -2.14
UBP3YER151C CWC15Q03772 175 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C PUF6Q04373 656 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C YOR059CQ08448 450 aaKnown RBP1.66□□□□□ -2.14
UBP3YER151C AIM46P38885 310 aa1.65□□□□□ -2.15
UBP3YER151C FOX2Q02207 900 aaKnown RBP1.65□□□□□ -2.15
UBP3YER151C ABZ1P37254 787 aaPredicted RBP1.65□□□□□ -2.15
UBP3YER151C AIM3P38266 947 aaKnown RBP1.65□□□□□ -2.15
UBP3YER151C UBX7P38349 436 aa1.65□□□□□ -2.15
UBP3YER151C CTR9P89105 1077 aa1.65□□□□□ -2.15
UBP3YER151C POL3P15436 1097 aa1.64□□□□□ -2.15
UBP3YER151C PRP5P21372 849 aaPredicted RBP1.64□□□□□ -2.15
UBP3YER151C PES4P39684 611 aa1.64□□□□□ -2.15
UBP3YER151C AIM21P40563 679 aa1.64□□□□□ -2.15
UBP3YER151C UTP22P53254 1237 aaPredicted RBP1.64□□□□□ -2.15
UBP3YER151C MDG1P53885 366 aa1.64□□□□□ -2.15
UBP3YER151C YOR223WQ12015 292 aa1.64□□□□□ -2.15
UBP3YER151C YLL054CQ12244 843 aa1.64□□□□□ -2.15
UBP3YER151C LPX1Q12405 387 aaKnown RBP1.64□□□□□ -2.15
UBP3YER151C TY4B-HP0C2J7 1802 aa1.64□□□□□ -2.15
UBP3YER151C RAD9P14737 1309 aa1.64□□□□□ -2.15
UBP3YER151C SRS2P12954 1174 aa1.64□□□□□ -2.15
UBP3YER151C UGA2P38067 497 aa1.64□□□□□ -2.15
UBP3YER151C TIF6Q12522 245 aaKnown RBP1.64□□□□□ -2.15
UBP3YER151C NUP145P49687 1317 aa1.63□□□□□ -2.15
UBP3YER151C GPT2P36148 743 aa1.63□□□□□ -2.15
UBP3YER151C PEX7P39108 375 aa1.63□□□□□ -2.15
UBP3YER151C ALT1P52893 592 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms