RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W LSB6P42951 607 aa3.78□□□□□ -1.8
VPS41YDR080W YNL011CP53980 444 aa3.78□□□□□ -1.8
VPS41YDR080W CDC55Q00362 526 aa3.78□□□□□ -1.8
VPS41YDR080W RSC2Q06488 889 aa3.78□□□□□ -1.8
VPS41YDR080W TY3B-IQ7LHG5 1498 aaKnown RBP3.78□□□□□ -1.8
VPS41YDR080W HAS1Q03532 505 aaKnown RBP3.78□□□□□ -1.81
VPS41YDR080W ROM2P51862 1356 aaKnown RBP3.78□□□□□ -1.81
VPS41YDR080W SNF2P22082 1703 aa3.77□□□□□ -1.81
VPS41YDR080W PRP5P21372 849 aaPredicted RBP3.77□□□□□ -1.81
VPS41YDR080W RAV1P47104 1357 aa3.77□□□□□ -1.81
VPS41YDR080W ERS1P17261 260 aa3.77□□□□□ -1.81
VPS41YDR080W MET4P32389 672 aa3.77□□□□□ -1.81
VPS41YDR080W YHL050CP38721 697 aa3.77□□□□□ -1.81
VPS41YDR080W YHR219WP38900 624 aa3.77□□□□□ -1.81
VPS41YDR080W SAP155P43612 1002 aa3.76□□□□□ -1.81
VPS41YDR080W GUP1P53154 560 aa3.76□□□□□ -1.81
VPS41YDR080W SEN54Q02825 467 aaPredicted RBP3.76□□□□□ -1.81
VPS41YDR080W MSH6Q03834 1242 aa3.76□□□□□ -1.81
VPS41YDR080W NPR1P22211 790 aa3.76□□□□□ -1.81
VPS41YDR080W UGA2P38067 497 aa3.76□□□□□ -1.81
VPS41YDR080W YPL034WQ03083 165 aa3.76□□□□□ -1.81
VPS41YDR080W FLP1P03870 423 aa3.75□□□□□ -1.81
VPS41YDR080W SAC7P17121 654 aa3.75□□□□□ -1.81
VPS41YDR080W ARI1P53111 347 aaKnown RBP3.75□□□□□ -1.81
VPS41YDR080W BSC2Q05611 235 aa3.75□□□□□ -1.81
VPS41YDR080W SFA1P32771 386 aa3.75□□□□□ -1.81
VPS41YDR080W TAT1P38085 619 aa3.75□□□□□ -1.81
VPS41YDR080W NCE103P53615 221 aa3.75□□□□□ -1.81
VPS41YDR080W PHO4P07270 312 aaKnown RBP3.74□□□□□ -1.81
VPS41YDR080W INP54Q08227 384 aaKnown RBP3.74□□□□□ -1.81
VPS41YDR080W UGA4P32837 571 aa3.73□□□□□ -1.81
VPS41YDR080W NUT1P53114 1132 aa3.73□□□□□ -1.81
VPS41YDR080W REC8Q12188 680 aa3.73□□□□□ -1.81
VPS41YDR080W YEF3P16521 1044 aaKnown RBP3.73□□□□□ -1.81
VPS41YDR080W RAD9P14737 1309 aa3.73□□□□□ -1.81
VPS41YDR080W TY1A-LR4P0C2I8 440 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W TY1A-DR6P0CX70 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-ER1P0CX71 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-LR2P0CX72 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-PLP0CX73 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-JR1P0CX74 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-LR3P0CX75 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-ML2P0CX76 440 aa3.72□□□□□ -1.81
VPS41YDR080W NAM7P30771 971 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W MSC6Q08818 692 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W TY1A-GR1Q12085 440 aa3.72□□□□□ -1.81
VPS41YDR080W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W TY1A-OLQ92392 440 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W HTS1P07263 546 aaKnown RBP3.72□□□□□ -1.81
VPS41YDR080W YBR287WP38355 427 aa3.72□□□□□ -1.81
VPS41YDR080W DAK2P43550 591 aa3.72□□□□□ -1.81
VPS41YDR080W DSE4P53753 1117 aa3.72□□□□□ -1.81
VPS41YDR080W PSK1P31374 1356 aa3.72□□□□□ -1.81
VPS41YDR080W YRF1-3P0CX14 1859 aa3.72□□□□□ -1.81
VPS41YDR080W YRF1-7P0CX15 1859 aa3.72□□□□□ -1.81
VPS41YDR080W LEM3P42838 414 aa3.72□□□□□ -1.81
VPS41YDR080W YRF1-6P53819 1859 aa3.72□□□□□ -1.81
VPS41YDR080W YIG1Q08956 461 aa3.72□□□□□ -1.81
VPS41YDR080W ELG1Q12050 791 aa3.72□□□□□ -1.81
VPS41YDR080W RSF2P46974 1380 aa3.71□□□□□ -1.82
VPS41YDR080W SPT7P35177 1332 aa3.71□□□□□ -1.82
VPS41YDR080W RTC1Q08281 1341 aa3.71□□□□□ -1.82
VPS41YDR080W SEA4P38164 1038 aa3.71□□□□□ -1.82
VPS41YDR080W PPX1P38698 397 aa3.71□□□□□ -1.82
VPS41YDR080W NEO1P40527 1151 aa3.71□□□□□ -1.82
VPS41YDR080W HEM13P11353 328 aaKnown RBP3.71□□□□□ -1.82
VPS41YDR080W FET4P40988 552 aa3.71□□□□□ -1.82
VPS41YDR080W SPO71Q03868 1245 aa3.71□□□□□ -1.82
VPS41YDR080W IKI3Q06706 1349 aaKnown RBP3.7□□□□□ -1.82
VPS41YDR080W TRP3P00937 484 aa3.7□□□□□ -1.82
VPS41YDR080W KIP3P53086 805 aaKnown RBP3.7□□□□□ -1.82
VPS41YDR080W YAF9P53930 226 aa3.7□□□□□ -1.82
VPS41YDR080W YLR122CQ12312 125 aa3.7□□□□□ -1.82
VPS41YDR080W ADE6P38972 1358 aaKnown RBP3.7□□□□□ -1.82
VPS41YDR080W YHL008CP38750 627 aa3.7□□□□□ -1.82
VPS41YDR080W INP52P50942 1183 aa3.69□□□□□ -1.82
VPS41YDR080W MON1P53129 644 aa3.69□□□□□ -1.82
VPS41YDR080W NOP8Q08287 484 aaPredicted RBP3.69□□□□□ -1.82
VPS41YDR080W NAP1P25293 417 aaKnown RBP3.69□□□□□ -1.82
VPS41YDR080W YKR073CP36153 106 aa3.69□□□□□ -1.82
VPS41YDR080W EXO5P38289 585 aa3.69□□□□□ -1.82
VPS41YDR080W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
VPS41YDR080W APC1P53886 1748 aa3.68□□□□□ -1.82
VPS41YDR080W MAE1P36013 669 aaKnown RBP3.68□□□□□ -1.82
VPS41YDR080W RPN11P43588 306 aaKnown RBP3.68□□□□□ -1.82
VPS41YDR080W RRP15Q06511 250 aaPredicted RBP3.68□□□□□ -1.82
VPS41YDR080W NOC3Q07896 663 aaPredicted RBP3.68□□□□□ -1.82
VPS41YDR080W NPR2P39923 615 aa3.68□□□□□ -1.82
VPS41YDR080W ATE1P16639 503 aa3.67□□□□□ -1.82
VPS41YDR080W PRP40P33203 583 aaKnown RBP3.67□□□□□ -1.82
VPS41YDR080W SAF1P38352 637 aa3.67□□□□□ -1.82
VPS41YDR080W FAA3P39002 694 aa3.67□□□□□ -1.82
VPS41YDR080W DOT5P40553 215 aa3.67□□□□□ -1.82
VPS41YDR080W CTH1P47976 325 aa3.67□□□□□ -1.82
VPS41YDR080W RSC6P25632 483 aa3.67□□□□□ -1.82
VPS41YDR080W PRP45P28004 379 aaPredicted RBP3.67□□□□□ -1.82
VPS41YDR080W AKR1P39010 764 aa3.67□□□□□ -1.82
VPS41YDR080W ALO1P54783 526 aaKnown RBP3.67□□□□□ -1.82
VPS41YDR080W NOG1Q02892 647 aaKnown RBP3.67□□□□□ -1.82
VPS41YDR080W STM1P39015 273 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms