RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 COL18A1P39060 1754 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
PHGDH-218ENST00000641491 SPATA31A1Q5TZJ5 1347 aa17.06■□□□□ 0.32
PHGDH-218ENST00000641491 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
PHGDH-218ENST00000641491 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
PHGDH-218ENST00000641491 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
PHGDH-218ENST00000641491 KDRP35968 1356 aa17.04■□□□□ 0.32
PHGDH-218ENST00000641491 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-218ENST00000641491 SEPT12Q8IYM1 358 aa17.04■□□□□ 0.32
PHGDH-218ENST00000641491 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
PHGDH-218ENST00000641491 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
PHGDH-218ENST00000641491 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
PHGDH-218ENST00000641491 GLI3P10071 1580 aa17.03■□□□□ 0.32
PHGDH-218ENST00000641491 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
PHGDH-218ENST00000641491 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHGDH-218ENST00000641491 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
PHGDH-218ENST00000641491 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
PHGDH-218ENST00000641491 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 EXOC5O00471 708 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 DDB1Q16531 1140 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-218ENST00000641491 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
PHGDH-218ENST00000641491 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.32
PHGDH-218ENST00000641491 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
PHGDH-218ENST00000641491 PSDA5PKW4 1024 aaPredicted RBP17■□□□□ 0.31
PHGDH-218ENST00000641491 HSP90AB1P08238 724 aaKnown RBP17■□□□□ 0.31
PHGDH-218ENST00000641491 NFE2L2Q16236 605 aa17■□□□□ 0.31
PHGDH-218ENST00000641491 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
PHGDH-218ENST00000641491 NGEFQ8N5V2 710 aa17■□□□□ 0.31
PHGDH-218ENST00000641491 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
PHGDH-218ENST00000641491 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
PHGDH-218ENST00000641491 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
PHGDH-218ENST00000641491 APAF1O14727 1248 aa16.99■□□□□ 0.31
PHGDH-218ENST00000641491 BAG6P46379 1132 aa16.99■□□□□ 0.31
PHGDH-218ENST00000641491 RIPK4P57078 832 aa16.99■□□□□ 0.31
PHGDH-218ENST00000641491 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
PHGDH-218ENST00000641491 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
PHGDH-218ENST00000641491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
PHGDH-218ENST00000641491 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-218ENST00000641491 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
PHGDH-218ENST00000641491 IFNL2Q8IZJ0 200 aa16.98■□□□□ 0.31
PHGDH-218ENST00000641491 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
PHGDH-218ENST00000641491 MEGF6O75095 1541 aa16.97■□□□□ 0.31
PHGDH-218ENST00000641491 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
PHGDH-218ENST00000641491 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
PHGDH-218ENST00000641491 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
PHGDH-218ENST00000641491 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
PHGDH-218ENST00000641491 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
PHGDH-218ENST00000641491 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
PHGDH-218ENST00000641491 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
PHGDH-218ENST00000641491 TNS2Q63HR2 1409 aa16.96■□□□□ 0.3
PHGDH-218ENST00000641491 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
PHGDH-218ENST00000641491 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
PHGDH-218ENST00000641491 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
PHGDH-218ENST00000641491 TEFQ10587 303 aa16.93■□□□□ 0.3
PHGDH-218ENST00000641491 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
PHGDH-218ENST00000641491 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
PHGDH-218ENST00000641491 PHKG2P15735 406 aa16.92■□□□□ 0.3
PHGDH-218ENST00000641491 EN1Q05925 392 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-218ENST00000641491 DCAF5Q96JK2 942 aa16.91■□□□□ 0.3
PHGDH-218ENST00000641491 R3HDM1Q15032 1099 aaKnown RBP16.9■□□□□ 0.3
PHGDH-218ENST00000641491 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
PHGDH-218ENST00000641491 CCDC27Q2M243 656 aa16.89■□□□□ 0.29
PHGDH-218ENST00000641491 MPRIPQ6WCQ1 1025 aa16.89■□□□□ 0.29
PHGDH-218ENST00000641491 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-218ENST00000641491 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
PHGDH-218ENST00000641491 CABP4P57796 275 aa16.88■□□□□ 0.29
PHGDH-218ENST00000641491 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
PHGDH-218ENST00000641491 YY1P25490 414 aa16.87■□□□□ 0.29
PHGDH-218ENST00000641491 MCM10Q7L590 875 aa16.87■□□□□ 0.29
PHGDH-218ENST00000641491 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
PHGDH-218ENST00000641491 CYP27B1O15528 508 aa16.86■□□□□ 0.29
PHGDH-218ENST00000641491 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
PHGDH-218ENST00000641491 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
PHGDH-218ENST00000641491 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
PHGDH-218ENST00000641491 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
PHGDH-218ENST00000641491 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
PHGDH-218ENST00000641491 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
PHGDH-218ENST00000641491 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
PHGDH-218ENST00000641491 WWC1Q8IX03 1113 aa16.85■□□□□ 0.29
PHGDH-218ENST00000641491 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
PHGDH-218ENST00000641491 GNAI1P63096 354 aa16.84■□□□□ 0.29
PHGDH-218ENST00000641491 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
PHGDH-218ENST00000641491 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
PHGDH-218ENST00000641491 THSD7AQ9UPZ6 1657 aa16.84■□□□□ 0.29
PHGDH-218ENST00000641491 FAM196AQ6ZSG2 479 aa16.83■□□□□ 0.28
PHGDH-218ENST00000641491 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
PHGDH-218ENST00000641491 E9PSI1 815 aa16.82■□□□□ 0.28
PHGDH-218ENST00000641491 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-218ENST00000641491 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
PHGDH-218ENST00000641491 MARCH10Q8NA82 808 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-218ENST00000641491 TSPYL4Q9UJ04 414 aa16.82■□□□□ 0.28
PHGDH-218ENST00000641491 TRIM35Q9UPQ4 493 aa16.82■□□□□ 0.28
PHGDH-218ENST00000641491 IL16Q14005 1332 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms