RNA–Protein interactions for RNA: ENST00000640824.1

KCNMA1-290, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-290ENST00000640824 NSD2O96028 1365 aa11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 PLSCR1O15162 318 aa11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 CNGB1Q14028 1251 aaPredicted RBP11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 CC2D1BQ5T0F9 858 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 EYA1Q99502 592 aa11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 BCL9O00512 1426 aa11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 FAM208AQ9UK61 1670 aaKnown RBP11.94□□□□□ -0.5
KCNMA1-290ENST00000640824 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-290ENST00000640824 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
KCNMA1-290ENST00000640824 EIF4A2Q14240 407 aaKnown RBP11.93□□□□□ -0.5
KCNMA1-290ENST00000640824 ANKRD26Q9UPS8 1709 aa11.92□□□□□ -0.5
KCNMA1-290ENST00000640824 PROM2Q8N271 834 aa11.92□□□□□ -0.5
KCNMA1-290ENST00000640824 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
KCNMA1-290ENST00000640824 NBPF14Q5TI25 921 aa11.91□□□□□ -0.5
KCNMA1-290ENST00000640824 PARD3Q8TEW0 1356 aa11.91□□□□□ -0.5
KCNMA1-290ENST00000640824 MEGF6O75095 1541 aa11.91□□□□□ -0.5
KCNMA1-290ENST00000640824 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
KCNMA1-290ENST00000640824 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
KCNMA1-290ENST00000640824 MTHFSP49914 203 aa11.89□□□□□ -0.51
KCNMA1-290ENST00000640824 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
KCNMA1-290ENST00000640824 CYP27B1O15528 508 aa11.88□□□□□ -0.51
KCNMA1-290ENST00000640824 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
KCNMA1-290ENST00000640824 SPG7Q9UQ90 795 aa11.88□□□□□ -0.51
KCNMA1-290ENST00000640824 IL13P35225 146 aa11.87□□□□□ -0.51
KCNMA1-290ENST00000640824 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
KCNMA1-290ENST00000640824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
KCNMA1-290ENST00000640824 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
KCNMA1-290ENST00000640824 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
KCNMA1-290ENST00000640824 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
KCNMA1-290ENST00000640824 NPC1L1Q9UHC9 1359 aa11.85□□□□□ -0.51
KCNMA1-290ENST00000640824 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
KCNMA1-290ENST00000640824 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
KCNMA1-290ENST00000640824 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 PLEKHO1Q53GL0 409 aaPredicted RBP11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 IFNL2Q8IZJ0 200 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 RREB1Q92766 1687 aa11.84□□□□□ -0.51
KCNMA1-290ENST00000640824 BTAF1O14981 1849 aa11.83□□□□□ -0.51
KCNMA1-290ENST00000640824 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
KCNMA1-290ENST00000640824 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
KCNMA1-290ENST00000640824 LRRC4BQ9NT99 713 aa11.83□□□□□ -0.52
KCNMA1-290ENST00000640824 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
KCNMA1-290ENST00000640824 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
KCNMA1-290ENST00000640824 PHKG2P15735 406 aa11.82□□□□□ -0.52
KCNMA1-290ENST00000640824 KCNA4P22459 653 aa11.82□□□□□ -0.52
KCNMA1-290ENST00000640824 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
KCNMA1-290ENST00000640824 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 HMOX1P09601 288 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 KCNQ4P56696 695 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 PIGBQ92521 554 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
KCNMA1-290ENST00000640824 ZNF530Q6P9A1 599 aaPredicted RBP11.8□□□□□ -0.52
KCNMA1-290ENST00000640824 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
KCNMA1-290ENST00000640824 U2SURPO15042 1029 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 PDGFDQ9GZP0 370 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 CCNL1Q9UK58 526 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
KCNMA1-290ENST00000640824 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 ITGB4P16144 1822 aa11.78□□□□□ -0.52
KCNMA1-290ENST00000640824 ERVV-2B6SEH9 535 aa11.77□□□□□ -0.53
KCNMA1-290ENST00000640824 ZNF827Q17R98 1081 aa11.77□□□□□ -0.53
KCNMA1-290ENST00000640824 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
KCNMA1-290ENST00000640824 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
KCNMA1-290ENST00000640824 KDRP35968 1356 aa11.77□□□□□ -0.53
KCNMA1-290ENST00000640824 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
KCNMA1-290ENST00000640824 SPON1Q9HCB6 807 aa11.76□□□□□ -0.53
KCNMA1-290ENST00000640824 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
KCNMA1-290ENST00000640824 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
KCNMA1-290ENST00000640824 PLEKHG2Q9H7P9 1386 aa11.76□□□□□ -0.53
KCNMA1-290ENST00000640824 CABP4P57796 275 aa11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
KCNMA1-290ENST00000640824 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
KCNMA1-290ENST00000640824 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
KCNMA1-290ENST00000640824 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
KCNMA1-290ENST00000640824 LY75O60449 1722 aa11.74□□□□□ -0.53
KCNMA1-290ENST00000640824 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
KCNMA1-290ENST00000640824 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
KCNMA1-290ENST00000640824 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-290ENST00000640824 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-290ENST00000640824 SIK1P57059 783 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms