RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
ATM-230ENST00000640388 TRAK2O60296 914 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 LILRA1O75019 489 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 PPFIA3O75145 1194 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 UPP2O95045 317 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 ADD1P35611 737 aaKnown RBP6.57□□□□□ -1.36
ATM-230ENST00000640388 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 Q6ZVU0 165 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 TRIM52Q96A61 297 aa6.57□□□□□ -1.36
ATM-230ENST00000640388 CDCA7Q9BWT1 371 aaPredicted RBP6.57□□□□□ -1.36
ATM-230ENST00000640388 ESF1Q9H501 851 aaKnown RBP6.57□□□□□ -1.36
ATM-230ENST00000640388 ZNF777Q9ULD5 760 aaPredicted RBP6.57□□□□□ -1.36
ATM-230ENST00000640388 PIK3CDO00329 1044 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 BMP2P12643 396 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 SCTRP47872 440 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 C14orf37Q86TY3 774 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 GLMNQ92990 594 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 AGBL1Q96MI9 1066 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 TSEN34Q9BSV6 310 aaKnown RBP6.56□□□□□ -1.36
ATM-230ENST00000640388 DNMT3LQ9UJW3 386 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 DOLKQ9UPQ8 538 aa6.56□□□□□ -1.36
ATM-230ENST00000640388 ERVK-9P63128 1117 aa6.55□□□□□ -1.36
ATM-230ENST00000640388 RELBQ01201 579 aa6.55□□□□□ -1.36
ATM-230ENST00000640388 CC2D2BQ6DHV5 1058 aa6.55□□□□□ -1.36
ATM-230ENST00000640388 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
ATM-230ENST00000640388 MYCP01106 439 aaPredicted RBP6.54□□□□□ -1.36
ATM-230ENST00000640388 ADH1AP07327 375 aa6.54□□□□□ -1.36
ATM-230ENST00000640388 SKIP12755 728 aa6.54□□□□□ -1.36
ATM-230ENST00000640388 OXLD1Q5BKU9 147 aa6.54□□□□□ -1.36
ATM-230ENST00000640388 PLPP7Q8NBV4 271 aa6.54□□□□□ -1.36
ATM-230ENST00000640388 ZNF395Q9H8N7 513 aaPredicted RBP6.54□□□□□ -1.36
ATM-230ENST00000640388 CHIC2Q9UKJ5 165 aa6.54□□□□□ -1.36
ATM-230ENST00000640388 USP4Q13107 963 aa6.53□□□□□ -1.36
ATM-230ENST00000640388 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.53□□□□□ -1.36
ATM-230ENST00000640388 MAP7D1Q3KQU3 841 aa6.53□□□□□ -1.36
ATM-230ENST00000640388 ATP5J2-PTCD1G3V325 749 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 SPINT1O43278 529 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 PTGIRP43119 386 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 TBC1D9Q6ZT07 1266 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 KDF1Q8NAX2 398 aaPredicted RBP6.52□□□□□ -1.37
ATM-230ENST00000640388 NANOS1Q8WY41 292 aaKnown RBP6.52□□□□□ -1.37
ATM-230ENST00000640388 UCN2Q96RP3 112 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 OSBPL3Q9H4L5 887 aa6.52□□□□□ -1.37
ATM-230ENST00000640388 TTLL8A6PVC2 850 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 KCNMA1Q12791 1236 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 CYP2U1Q7Z449 544 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 DEPDC4Q8N2C3 294 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 SIRT1Q96EB6 747 aa6.51□□□□□ -1.37
ATM-230ENST00000640388 INSM2Q96T92 566 aaPredicted RBP6.51□□□□□ -1.37
ATM-230ENST00000640388 ABCC9O60706 1549 aa6.5□□□□□ -1.37
ATM-230ENST00000640388 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
ATM-230ENST00000640388 A0A1W2PRU2 124 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 FIGNL2A6NMB9 653 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 USP17L5A8MUK1 530 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 MEN1O00255 615 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 ATP9BO43861 1147 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 CTSOP43234 321 aaPredicted RBP6.49□□□□□ -1.37
ATM-230ENST00000640388 GSK3AP49840 483 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 KRT76Q01546 638 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 PTSQ03393 145 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 NCOA4Q13772 614 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 EML3Q32P44 896 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 ARHGEF10LQ9HCE6 1279 aa6.49□□□□□ -1.37
ATM-230ENST00000640388 TFIP11Q9UBB9 837 aaKnown RBP6.49□□□□□ -1.37
ATM-230ENST00000640388 LZTS3O60299 673 aaPredicted RBP6.48□□□□□ -1.37
ATM-230ENST00000640388 RAB6BQ9NRW1 208 aa6.48□□□□□ -1.37
ATM-230ENST00000640388 NOD1Q9Y239 953 aa6.48□□□□□ -1.37
ATM-230ENST00000640388 SLC35F4A4IF30 521 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 USP17L3A6NCW0 530 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 USP17L4A6NCW7 530 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
ATM-230ENST00000640388 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 STAU1O95793 577 aaKnown RBP6.47□□□□□ -1.37
ATM-230ENST00000640388 GNRH1P01148 92 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 USP17L1Q7RTZ2 530 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 NLRP3Q96P20 1036 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 PPP1R12CQ9BZL4 782 aa6.47□□□□□ -1.37
ATM-230ENST00000640388 PLEKHM2Q8IWE5 1019 aa6.46□□□□□ -1.38
ATM-230ENST00000640388 GPR161Q8N6U8 529 aaKnown RBP6.46□□□□□ -1.38
ATM-230ENST00000640388 LMOD1P29536 600 aaPredicted RBP6.45□□□□□ -1.38
ATM-230ENST00000640388 GTF2IP78347 998 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 CLN3Q13286 438 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 FOXD4L5Q5VV16 416 aaPredicted RBP6.45□□□□□ -1.38
ATM-230ENST00000640388 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 CCDC155Q8N6L0 562 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 RNF217Q8TC41 542 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 CNKSR1Q969H4 720 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 ETNK1Q9HBU6 452 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 MKRN1Q9UHC7 482 aaKnown RBP6.45□□□□□ -1.38
ATM-230ENST00000640388 PCDHGA11Q9Y5H2 935 aa6.45□□□□□ -1.38
ATM-230ENST00000640388 MAFBQ9Y5Q3 323 aaPredicted RBP6.45□□□□□ -1.38
ATM-230ENST00000640388 RNF225M0QZC1 329 aaPredicted RBP6.44□□□□□ -1.38
ATM-230ENST00000640388 IL2RAP01589 272 aa6.44□□□□□ -1.38
ATM-230ENST00000640388 RNF144AP50876 292 aaPredicted RBP6.44□□□□□ -1.38
ATM-230ENST00000640388 PSME1Q06323 249 aa6.44□□□□□ -1.38
ATM-230ENST00000640388 ESCO1Q5FWF5 840 aa6.44□□□□□ -1.38
ATM-230ENST00000640388 SLC27A3Q5K4L6 730 aa6.44□□□□□ -1.38
ATM-230ENST00000640388 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms