RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 KIF3CO14782 793 aa19.57■□□□□ 0.72
HLA-C-210ENST00000640219 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
HLA-C-210ENST00000640219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.56■□□□□ 0.72
HLA-C-210ENST00000640219 LY75O60449 1722 aa19.55■□□□□ 0.72
HLA-C-210ENST00000640219 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
HLA-C-210ENST00000640219 USP31Q70CQ4 1352 aa19.55■□□□□ 0.72
HLA-C-210ENST00000640219 DNAJC5GQ8N7S2 189 aa19.54■□□□□ 0.72
HLA-C-210ENST00000640219 NSD2O96028 1365 aa19.54■□□□□ 0.72
HLA-C-210ENST00000640219 NME9Q86XW9 330 aa19.52■□□□□ 0.72
HLA-C-210ENST00000640219 LTN1O94822 1766 aa19.52■□□□□ 0.71
HLA-C-210ENST00000640219 WWC3Q9ULE0 1092 aa19.51■□□□□ 0.71
HLA-C-210ENST00000640219 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
HLA-C-210ENST00000640219 USP47Q96K76 1375 aa19.5■□□□□ 0.71
HLA-C-210ENST00000640219 FLAD1Q8NFF5 587 aa19.5■□□□□ 0.71
HLA-C-210ENST00000640219 IGSF1Q8N6C5 1336 aa19.5■□□□□ 0.71
HLA-C-210ENST00000640219 LTV1Q96GA3 475 aaPredicted RBP19.49■□□□□ 0.71
HLA-C-210ENST00000640219 CAPN15O75808 1086 aa19.48■□□□□ 0.71
HLA-C-210ENST00000640219 TOMM70O94826 608 aa19.48■□□□□ 0.71
HLA-C-210ENST00000640219 ZCRB1Q8TBF4 217 aaKnown RBP19.48■□□□□ 0.71
HLA-C-210ENST00000640219 USP54Q70EL1 1684 aa19.47■□□□□ 0.71
HLA-C-210ENST00000640219 COL13A1Q5TAT6 717 aaPredicted RBP19.47■□□□□ 0.71
HLA-C-210ENST00000640219 IP6K1Q92551 441 aa19.47■□□□□ 0.71
HLA-C-210ENST00000640219 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
HLA-C-210ENST00000640219 HMGB2P26583 209 aaKnown RBP19.45■□□□□ 0.7
HLA-C-210ENST00000640219 SBNO2Q9Y2G9 1366 aa19.44■□□□□ 0.7
HLA-C-210ENST00000640219 C5P01031 1676 aa19.43■□□□□ 0.7
HLA-C-210ENST00000640219 FAM208AQ9UK61 1670 aaKnown RBP19.43■□□□□ 0.7
HLA-C-210ENST00000640219 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
HLA-C-210ENST00000640219 TNS4Q8IZW8 715 aa19.4■□□□□ 0.7
HLA-C-210ENST00000640219 KLRG1Q96E93 195 aa19.4■□□□□ 0.7
HLA-C-210ENST00000640219 TMC1Q8TDI8 760 aa19.39■□□□□ 0.69
HLA-C-210ENST00000640219 AK7Q96M32 723 aa19.39■□□□□ 0.69
HLA-C-210ENST00000640219 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
HLA-C-210ENST00000640219 MEGF6O75095 1541 aa19.39■□□□□ 0.69
HLA-C-210ENST00000640219 PHF14O94880 888 aa19.38■□□□□ 0.69
HLA-C-210ENST00000640219 PRELPP51888 382 aa19.38■□□□□ 0.69
HLA-C-210ENST00000640219 JMYQ8N9B5 988 aa19.38■□□□□ 0.69
HLA-C-210ENST00000640219 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
HLA-C-210ENST00000640219 NMRK2Q9NPI5 230 aa19.38■□□□□ 0.69
HLA-C-210ENST00000640219 WDR90Q96KV7 1748 aa19.37■□□□□ 0.69
HLA-C-210ENST00000640219 CICQ96RK0 1608 aaPredicted RBP19.37■□□□□ 0.69
HLA-C-210ENST00000640219 EDC4Q6P2E9 1401 aaKnown RBP19.37■□□□□ 0.69
HLA-C-210ENST00000640219 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
HLA-C-210ENST00000640219 HTRA3P83110 453 aa19.37■□□□□ 0.69
HLA-C-210ENST00000640219 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
HLA-C-210ENST00000640219 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
HLA-C-210ENST00000640219 HOXC9P31274 260 aa19.36■□□□□ 0.69
HLA-C-210ENST00000640219 SMIM5Q71RC9 77 aa19.36■□□□□ 0.69
HLA-C-210ENST00000640219 RBM46Q8TBY0 533 aaKnown RBP19.36■□□□□ 0.69
HLA-C-210ENST00000640219 TAF1LQ8IZX4 1826 aa19.35■□□□□ 0.69
HLA-C-210ENST00000640219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
HLA-C-210ENST00000640219 AMPHP49418 695 aa19.35■□□□□ 0.69
HLA-C-210ENST00000640219 SLC12A5Q9H2X9 1139 aa19.35■□□□□ 0.69
HLA-C-210ENST00000640219 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
HLA-C-210ENST00000640219 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
HLA-C-210ENST00000640219 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
HLA-C-210ENST00000640219 C16orf71Q8IYS4 520 aaPredicted RBP19.34■□□□□ 0.69
HLA-C-210ENST00000640219 NSD3Q9BZ95 1437 aa19.34■□□□□ 0.69
HLA-C-210ENST00000640219 CGNL1Q0VF96 1302 aa19.33■□□□□ 0.69
HLA-C-210ENST00000640219 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.68
HLA-C-210ENST00000640219 RGPD2P0DJD1 1756 aa19.32■□□□□ 0.68
HLA-C-210ENST00000640219 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
HLA-C-210ENST00000640219 RAPGEF4Q8WZA2 1011 aa19.32■□□□□ 0.68
HLA-C-210ENST00000640219 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
HLA-C-210ENST00000640219 BCS1LQ9Y276 419 aa19.32■□□□□ 0.68
HLA-C-210ENST00000640219 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
HLA-C-210ENST00000640219 SSFA2P28290 1259 aa19.31■□□□□ 0.68
HLA-C-210ENST00000640219 FSTL1Q12841 308 aa19.31■□□□□ 0.68
HLA-C-210ENST00000640219 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
HLA-C-210ENST00000640219 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
HLA-C-210ENST00000640219 FBLN1P23142 703 aa19.3■□□□□ 0.68
HLA-C-210ENST00000640219 USHBP1Q8N6Y0 703 aa19.3■□□□□ 0.68
HLA-C-210ENST00000640219 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
HLA-C-210ENST00000640219 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
HLA-C-210ENST00000640219 UBR3Q6ZT12 1888 aa19.29■□□□□ 0.68
HLA-C-210ENST00000640219 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
HLA-C-210ENST00000640219 COG3Q96JB2 828 aa19.29■□□□□ 0.68
HLA-C-210ENST00000640219 PCDH11XQ9BZA7 1347 aa19.28■□□□□ 0.68
HLA-C-210ENST00000640219 PCDH11YQ9BZA8 1340 aa19.28■□□□□ 0.68
HLA-C-210ENST00000640219 MMP10P09238 476 aa19.28■□□□□ 0.68
HLA-C-210ENST00000640219 TGFB2P61812 414 aa19.28■□□□□ 0.68
HLA-C-210ENST00000640219 A0A0G2JLW4 131 aa19.27■□□□□ 0.68
HLA-C-210ENST00000640219 FCHSD2O94868 740 aa19.25■□□□□ 0.67
HLA-C-210ENST00000640219 C9orf131Q5VYM1 1079 aa19.25■□□□□ 0.67
HLA-C-210ENST00000640219 LINC00116Q8NCU8 138 aa19.25■□□□□ 0.67
HLA-C-210ENST00000640219 GNPATO15228 680 aa19.24■□□□□ 0.67
HLA-C-210ENST00000640219 PIGBQ92521 554 aa19.24■□□□□ 0.67
HLA-C-210ENST00000640219 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
HLA-C-210ENST00000640219 RTL1A6NKG5 1358 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 PLEKHG2Q9H7P9 1386 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 CYP27B1O15528 508 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 SIK1P57059 783 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 CARD11Q9BXL7 1154 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
HLA-C-210ENST00000640219 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
HLA-C-210ENST00000640219 DPEP1P16444 411 aa19.22■□□□□ 0.67
HLA-C-210ENST00000640219 RRS1Q15050 365 aaKnown RBP19.22■□□□□ 0.67
HLA-C-210ENST00000640219 KIF13BQ9NQT8 1826 aa19.22■□□□□ 0.67
HLA-C-210ENST00000640219 SMG6Q86US8 1419 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms