RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	LAMC2	Q13753	1193 aa		4.25	□□□□□ -1.73
LMBR1-222	ENST00000638959	P3H3	Q8IVL6	736 aa		4.25	□□□□□ -1.73
LMBR1-222	ENST00000638959	GOLGA6L1	Q8N7Z2	621 aa		4.25	□□□□□ -1.73
LMBR1-222	ENST00000638959	KLRG1	Q96E93	195 aa		4.25	□□□□□ -1.73
LMBR1-222	ENST00000638959	TPSG1	Q9NRR2	321 aa		4.25	□□□□□ -1.73
LMBR1-222	ENST00000638959	CLCN1	P35523	988 aa		4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	MAP2K5	Q13163	448 aa		4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	FZD5	Q13467	585 aa		4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	ERFE	Q4G0M1	354 aa		4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	SH3BP5L	Q7L8J4	393 aa		4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	KCTD15	Q96SI1	283 aa	Predicted RBP	4.24	□□□□□ -1.73
LMBR1-222	ENST00000638959	TESPA1	A2RU30	521 aa	Predicted RBP	4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	CFAP99	D6REC4	459 aa		4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	HYAL3	O43820	417 aa	Predicted RBP	4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	ADH1A	P07327	375 aa		4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	SPIRE2	Q8WWL2	714 aa		4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	SLC10A4	Q96EP9	437 aa		4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	NUCKS1	Q9H1E3	243 aa	Known RBP	4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	DYRK1B	Q9Y463	629 aa		4.23	□□□□□ -1.73
LMBR1-222	ENST00000638959	PTGIR	P43119	386 aa		4.22	□□□□□ -1.73
LMBR1-222	ENST00000638959	DGKG	P49619	791 aa		4.22	□□□□□ -1.73
LMBR1-222	ENST00000638959	INTS6L	Q5JSJ4	861 aa	Known RBP	4.22	□□□□□ -1.73
LMBR1-222	ENST00000638959	SPATA31C1	P0DKV0	1188 aa		4.21	□□□□□ -1.74
LMBR1-222	ENST00000638959	SLCO4C1	Q6ZQN7	724 aa		4.21	□□□□□ -1.74
LMBR1-222	ENST00000638959	KRI1	Q8N9T8	703 aa	Known RBP	4.21	□□□□□ -1.74
LMBR1-222	ENST00000638959	TMPRSS4	Q9NRS4	437 aa		4.21	□□□□□ -1.74
LMBR1-222	ENST00000638959	CDV3	Q9UKY7	258 aa	Known RBP	4.21	□□□□□ -1.74
LMBR1-222	ENST00000638959	IRF6	O14896	467 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	PER1	O15534	1290 aa	Predicted RBP	4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	RNF144A	P50876	292 aa	Predicted RBP	4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	RIC3	Q7Z5B4	369 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	ZNF784	Q8NCA9	323 aa	Predicted RBP	4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	TSC1	Q92574	1164 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	BTBD6	Q96KE9	485 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	CFHR5	Q9BXR6	569 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	GGA1	Q9UJY5	639 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	PHF24	Q9UPV7	400 aa		4.2	□□□□□ -1.74
LMBR1-222	ENST00000638959	BMP4	P12644	408 aa		4.19	□□□□□ -1.74
LMBR1-222	ENST00000638959	RAB15	P59190	212 aa		4.19	□□□□□ -1.74
LMBR1-222	ENST00000638959	KDF1	Q8NAX2	398 aa	Predicted RBP	4.18	□□□□□ -1.74
LMBR1-222	ENST00000638959	FMNL2	Q96PY5	1086 aa		4.18	□□□□□ -1.74
LMBR1-222	ENST00000638959	ARHGAP9	Q9BRR9	750 aa		4.18	□□□□□ -1.74
LMBR1-222	ENST00000638959	KDM2A	Q9Y2K7	1162 aa		4.18	□□□□□ -1.74
LMBR1-222	ENST00000638959	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.18	□□□□□ -1.74
LMBR1-222	ENST00000638959	EPX	P11678	715 aa		4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	ADD1	P35611	737 aa	Known RBP	4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	POU4F2	Q12837	409 aa		4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	CCDC102A	Q96A19	550 aa		4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	PLVAP	Q9BX97	442 aa		4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	ZBTB3	Q9H5J0	574 aa		4.17	□□□□□ -1.74
LMBR1-222	ENST00000638959	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	MEN1	O00255	615 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	APBA3	O96018	575 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	F11	P03951	625 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	HRC	P23327	699 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	SLC27A3	Q5K4L6	730 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	CHSY3	Q70JA7	882 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	ZBTB33	Q86T24	672 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	RNF135	Q8IUD6	432 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	TRIM11	Q96F44	468 aa		4.16	□□□□□ -1.74
LMBR1-222	ENST00000638959	LILRA1	O75019	489 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	ELN	P15502	786 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	SSTR3	P32745	418 aa	Predicted RBP	4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	GPC1	P35052	558 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	GPAM	Q9HCL2	828 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	TIMMDC1	Q9NPL8	285 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	PCDHB15	Q9Y5E8	787 aa		4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.15	□□□□□ -1.75
LMBR1-222	ENST00000638959	NEURL1B	A8MQ27	555 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	THBS1	P07996	1170 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	NBPF20	Q3BBV1	942 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	PRRT3	Q5FWE3	981 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	NBPF10	Q6P3W6	841 aa	Known RBP	4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	NBPF15	Q8N660	670 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	KRTAP17-1	Q9BYP8	105 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	KRTAP4-11	Q9BYQ6	195 aa		4.14	□□□□□ -1.75
LMBR1-222	ENST00000638959	SPDYE3	A6NKU9	549 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	ATP5J2-PTCD1	G3V325	749 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	ERVH48-1	M5A8F1	160 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	C2CD2L	O14523	706 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	GJA5	P36382	358 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	CSPP1	Q1MSJ5	1256 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	CABLES1	Q8TDN4	633 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	CYLD	Q9NQC7	956 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	RNF114	Q9Y508	228 aa		4.13	□□□□□ -1.75
LMBR1-222	ENST00000638959	H2AFB1	P0C5Y9	115 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	H2AFB2	P0C5Z0	115 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	FGFR3	P22607	806 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	IRAK1	P51617	712 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	TAS1R3	Q7RTX0	852 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	ABHD17A	Q96GS6	310 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	KRTAP4-5	Q9BYR2	181 aa		4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	4.12	□□□□□ -1.75
LMBR1-222	ENST00000638959	WASL	O00401	505 aa	Predicted RBP	4.11	□□□□□ -1.75
LMBR1-222	ENST00000638959	ARAF	P10398	606 aa		4.11	□□□□□ -1.75
LMBR1-222	ENST00000638959	PDXDC2P	Q6P474	469 aa		4.11	□□□□□ -1.75
LMBR1-222	ENST00000638959	NLRP3	Q96P20	1036 aa		4.11	□□□□□ -1.75

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