RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CCDC178Q5BJE1 867 aa19.16■□□□□ 0.66
CACNA1A-258ENST00000638029 PRPF40AO75400 957 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-258ENST00000638029 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 LUC7LQ9NQ29 371 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 BIN2Q9UBW5 565 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 TRERF1Q96PN7 1200 aa19.14■□□□□ 0.66
CACNA1A-258ENST00000638029 GSTTP1A0A1W2PQM5 241 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 SLC26A8Q96RN1 970 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 BMP2KQ9NSY1 1161 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 JAKMIP3Q5VZ66 844 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TSPY26PQ9H489 355 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 EPB41L2O43491 1005 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CABP2Q9NPB3 220 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 RABEP1Q15276 862 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 PTPRGP23470 1445 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CTNNA2P26232 953 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 HIP1O00291 1037 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 TATP17735 454 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 EP400NLQ6ZTU2 488 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 LMAN1P49257 510 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 USP8P40818 1118 aa19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 MINDY4BA8MYZ0 360 aa19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 LETM1O95202 739 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 PANK1Q8TE04 598 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 SAMM50Q9Y512 469 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 SH3BP5O60239 455 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 OTUD6BQ8N6M0 293 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 CDC45O75419 566 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MTHFSP49914 203 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 DZIP1Q86YF9 867 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 UBAC1Q9BSL1 405 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MMRN2Q9H8L6 949 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MKNK2Q9HBH9 465 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 ARHGAP5Q13017 1502 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 FEZ1Q99689 392 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 OSCARQ8IYS5 282 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 SPTY2D1Q68D10 685 aaPredicted RBP19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 ZBTB9Q96C00 473 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 ATP2B3Q16720 1220 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 TIGD1Q96MW7 591 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 TNMDQ9H2S6 317 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 DPH6Q7L8W6 267 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 MRE11P49959 708 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 PDCP20941 246 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 RNF187Q5TA31 235 aaPredicted RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 TAF4BQ92750 862 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 KIF20AO95235 890 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 BMS1Q14692 1282 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 ZNF622Q969S3 477 aaKnown RBP eCLIP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 TRAK2O60296 914 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 LARP1Q6PKG0 1096 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 BBXQ8WY36 941 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 NEK4P51957 841 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CEP57L1Q8IYX8 460 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 PLS1Q14651 629 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CUX1P39880 1505 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CCP110O43303 1012 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 IFFO1Q0D2I5 559 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 KLHL10Q6JEL2 608 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 GNAI3P08754 354 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 SPATA24Q86W54 205 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 TMCO3Q6UWJ1 677 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 HOOK3Q86VS8 718 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 NOL7Q9UMY1 257 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 PPP1R12BO60237 982 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 GNAI2P04899 355 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CETN2P41208 172 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CCDC160A6NGH7 325 aa19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 SIRT1Q96EB6 747 aa19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 FERP16591 822 aa19.02■□□□□ 0.63
CACNA1A-258ENST00000638029 VAT1LQ9HCJ6 419 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms