RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 CCDC178Q5BJE1 867 aa19.16■□□□□ 0.66
CACNA1A-258ENST00000638029 PRPF40AO75400 957 aaKnown RBP19.16■□□□□ 0.66
CACNA1A-258ENST00000638029 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 LUC7LQ9NQ29 371 aaKnown RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 BIN2Q9UBW5 565 aaPredicted RBP19.15■□□□□ 0.66
CACNA1A-258ENST00000638029 TRERF1Q96PN7 1200 aa19.14■□□□□ 0.66
CACNA1A-258ENST00000638029 GSTTP1A0A1W2PQM5 241 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 SLC26A8Q96RN1 970 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 BMP2KQ9NSY1 1161 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 JAKMIP3Q5VZ66 844 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TSPY26PQ9H489 355 aa19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 EPB41L2O43491 1005 aaKnown RBP19.14■□□□□ 0.65
CACNA1A-258ENST00000638029 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CABP2Q9NPB3 220 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 RABEP1Q15276 862 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 PTPRGP23470 1445 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CTNNA2P26232 953 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
CACNA1A-258ENST00000638029 HIP1O00291 1037 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 TATP17735 454 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 EP400NLQ6ZTU2 488 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 SEC63Q9UGP8 760 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 LMAN1P49257 510 aa19.12■□□□□ 0.65
CACNA1A-258ENST00000638029 USP8P40818 1118 aa19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 MINDY4BA8MYZ0 360 aa19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 LETM1O95202 739 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-258ENST00000638029 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 PANK1Q8TE04 598 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 SAMM50Q9Y512 469 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 SH3BP5O60239 455 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 OTUD6BQ8N6M0 293 aa19.1■□□□□ 0.65
CACNA1A-258ENST00000638029 CDC45O75419 566 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MTHFSP49914 203 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 DZIP1Q86YF9 867 aaKnown RBP19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 UBAC1Q9BSL1 405 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MMRN2Q9H8L6 949 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 MKNK2Q9HBH9 465 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 ARHGAP5Q13017 1502 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 FEZ1Q99689 392 aa19.09■□□□□ 0.65
CACNA1A-258ENST00000638029 OSCARQ8IYS5 282 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 SPTY2D1Q68D10 685 aaPredicted RBP19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 ZBTB9Q96C00 473 aa19.08■□□□□ 0.65
CACNA1A-258ENST00000638029 ATP2B3Q16720 1220 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 TIGD1Q96MW7 591 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 TNMDQ9H2S6 317 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 DPH6Q7L8W6 267 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 MRE11P49959 708 aa19.08■□□□□ 0.64
CACNA1A-258ENST00000638029 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 PDCP20941 246 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 RNF187Q5TA31 235 aaPredicted RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 TAF4BQ92750 862 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 KIF20AO95235 890 aa19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 BMS1Q14692 1282 aaKnown RBP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 ZNF622Q969S3 477 aaKnown RBP eCLIP19.07■□□□□ 0.64
CACNA1A-258ENST00000638029 TRAK2O60296 914 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 LARP1Q6PKG0 1096 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 BBXQ8WY36 941 aaPredicted RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 NEK4P51957 841 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CEP57L1Q8IYX8 460 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 PLS1Q14651 629 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CUX1P39880 1505 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 CCP110O43303 1012 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 IFFO1Q0D2I5 559 aa19.06■□□□□ 0.64
CACNA1A-258ENST00000638029 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 KLHL10Q6JEL2 608 aa19.05■□□□□ 0.64
CACNA1A-258ENST00000638029 GNAI3P08754 354 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 SPATA24Q86W54 205 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 TMCO3Q6UWJ1 677 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 HOOK3Q86VS8 718 aa19.04■□□□□ 0.64
CACNA1A-258ENST00000638029 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 NOL7Q9UMY1 257 aaKnown RBP19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 PPP1R12BO60237 982 aaPredicted RBP19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 GNAI2P04899 355 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CETN2P41208 172 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
CACNA1A-258ENST00000638029 CCDC160A6NGH7 325 aa19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 PIP4K2AP48426 406 aaPredicted RBP19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 SIRT1Q96EB6 747 aa19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 NOP2P46087 812 aaKnown RBP19.02■□□□□ 0.64
CACNA1A-258ENST00000638029 FERP16591 822 aa19.02■□□□□ 0.63
CACNA1A-258ENST00000638029 VAT1LQ9HCJ6 419 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms