RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 FAM184AQ8NB25 1140 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 BRD1O95696 1058 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 MCCP23508 829 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
CHD2-226ENST00000636881 MBIPQ9NS73 344 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 STK26Q9P289 416 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 ZSCAN20P17040 1043 aaPredicted RBP10.34□□□□□ -0.75
CHD2-226ENST00000636881 PLCB2Q00722 1185 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 FANCAO15360 1455 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 PPLO60437 1756 aa10.34□□□□□ -0.75
CHD2-226ENST00000636881 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 CHAF1AQ13111 956 aaPredicted RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 GTPBP4Q9BZE4 634 aaKnown RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 TTC12Q9H892 705 aaPredicted RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 LRRC7Q96NW7 1537 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 GLI2P10070 1586 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 ZCCHC11Q5TAX3 1644 aaKnown RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 ADCY5O95622 1261 aa10.33□□□□□ -0.76
CHD2-226ENST00000636881 RPAP2Q8IXW5 612 aaPredicted RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 C17orf53Q8N3J3 647 aaPredicted RBP10.33□□□□□ -0.76
CHD2-226ENST00000636881 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
CHD2-226ENST00000636881 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
CHD2-226ENST00000636881 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
CHD2-226ENST00000636881 GADD45BO75293 160 aaPredicted RBP10.32□□□□□ -0.76
CHD2-226ENST00000636881 PDCL2Q8N4E4 241 aa10.32□□□□□ -0.76
CHD2-226ENST00000636881 FAM135BQ49AJ0 1406 aa10.31□□□□□ -0.76
CHD2-226ENST00000636881 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
CHD2-226ENST00000636881 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
CHD2-226ENST00000636881 ARHGEF28Q8N1W1 1705 aaKnown RBP10.31□□□□□ -0.76
CHD2-226ENST00000636881 KIF24Q5T7B8 1368 aa10.31□□□□□ -0.76
CHD2-226ENST00000636881 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
CHD2-226ENST00000636881 USP48Q86UV5 1035 aa10.31□□□□□ -0.76
CHD2-226ENST00000636881 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
CHD2-226ENST00000636881 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
CHD2-226ENST00000636881 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 CEP85Q6P2H3 762 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 KNDC1Q76NI1 1749 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 ATP2B3Q16720 1220 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 CCDC183Q5T5S1 534 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 ZFYVE9O95405 1425 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 ANKRD26Q9UPS8 1709 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 WDR33Q9C0J8 1336 aaKnown RBP10.3□□□□□ -0.76
CHD2-226ENST00000636881 ERCC6L2Q5T890 1561 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 LETM1O95202 739 aaPredicted RBP10.3□□□□□ -0.76
CHD2-226ENST00000636881 KIF20AO95235 890 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
CHD2-226ENST00000636881 FKBP5Q13451 457 aaPredicted RBP10.3□□□□□ -0.76
CHD2-226ENST00000636881 GGT6Q6P531 493 aa10.3□□□□□ -0.76
CHD2-226ENST00000636881 HMMRO75330 724 aa10.29□□□□□ -0.76
CHD2-226ENST00000636881 CUL4AQ13619 759 aa10.29□□□□□ -0.76
CHD2-226ENST00000636881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.769e-7■□□□□ 10.6
CHD2-226ENST00000636881 INTS4Q96HW7 963 aaKnown RBP10.29□□□□□ -0.76
CHD2-226ENST00000636881 PNPLA6Q8IY17 1366 aa10.29□□□□□ -0.76
CHD2-226ENST00000636881 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
CHD2-226ENST00000636881 FBLN1P23142 703 aa10.29□□□□□ -0.76
CHD2-226ENST00000636881 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
CHD2-226ENST00000636881 ARAP3Q8WWN8 1544 aa10.28□□□□□ -0.76
CHD2-226ENST00000636881 CHD1O14646 1710 aa10.28□□□□□ -0.76
CHD2-226ENST00000636881 SPTLC3Q9NUV7 552 aa10.28□□□□□ -0.76
CHD2-226ENST00000636881 ATP10DQ9P241 1426 aa10.28□□□□□ -0.76
CHD2-226ENST00000636881 CAMSAP1Q5T5Y3 1602 aa10.27□□□□□ -0.76
CHD2-226ENST00000636881 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 MX1P20591 662 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 PDE1AP54750 535 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 GOLGA6L6A8MZA4 724 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 RIOK3O14730 519 aaKnown RBP10.27□□□□□ -0.77
CHD2-226ENST00000636881 KDM4AO75164 1064 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
CHD2-226ENST00000636881 MEIS3Q99687 375 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.77
CHD2-226ENST00000636881 POLKQ9UBT6 870 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 PALD1Q9ULE6 856 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 TCHHQ07283 1943 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 MSH6P52701 1360 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 TPM3P06753 285 aa10.27□□□□□ -0.77
CHD2-226ENST00000636881 NPATQ14207 1427 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.777e-7■■■□□ 15.3
CHD2-226ENST00000636881 DCTN1Q14203 1278 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHD2-226ENST00000636881 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 LMTK2Q8IWU2 1503 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 RTL1A6NKG5 1358 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 ANAPC15P60006 121 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 SPC24Q8NBT2 197 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
CHD2-226ENST00000636881 TSHZ3Q63HK5 1081 aa10.25□□□□□ -0.77
CHD2-226ENST00000636881 ZNF771Q7L3S4 317 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms