RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ROBO2Q9HCK4 1378 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 ZBTB7CA1YPR0 619 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 ERC2O15083 957 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 SLC4A10Q6U841 1118 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 SPG7Q9UQ90 795 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 ABCC4O15439 1325 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 ADGRL3Q9HAR2 1447 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 LNPKQ9C0E8 428 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 MAP3K19Q56UN5 1328 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 CSB-PGBD3P0DP91 1061 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 ANKRD44Q8N8A2 993 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 TBC1D32Q96NH3 1257 aa5.6□□□□□ -1.51
SCN1A-210ENST00000635776 HIP1O00291 1037 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 CADPS2Q86UW7 1296 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 PCDHB15Q9Y5E8 787 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 ADAMTS13Q76LX8 1427 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 CEBPAP49715 358 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 HDGFL1Q5TGJ6 251 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 IP6K1Q92551 441 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 DCTPP1Q9H773 170 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 TATP17735 454 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 LTKP29376 864 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 CWC22Q9HCG8 908 aaKnown RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 MYOM1P52179 1685 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 TTC5Q8N0Z6 440 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 ZBTB7BO15156 539 aaPredicted RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 LRRFIP1Q32MZ4 808 aaKnown RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 C19orf44Q9H6X5 657 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 SLIT1O75093 1534 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 ARHGEF28Q8N1W1 1705 aaKnown RBP5.59□□□□□ -1.51
SCN1A-210ENST00000635776 IGSF1Q8N6C5 1336 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 MAP3K5Q99683 1374 aa5.59□□□□□ -1.51
SCN1A-210ENST00000635776 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.52
SCN1A-210ENST00000635776 ARHGAP23Q9P227 1491 aa5.59□□□□□ -1.52
SCN1A-210ENST00000635776 SNX21Q969T3 373 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 LRRCC1Q9C099 1032 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 CSPP1Q1MSJ5 1256 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 PLEKHG2Q9H7P9 1386 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 NFKBIBQ15653 356 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 ATP6V1DQ9Y5K8 247 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 CLTCQ00610 1675 aaKnown RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 HSP90AB2PQ58FF8 381 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 ZNF530Q6P9A1 599 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 DMRT2Q9Y5R5 561 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 HOXC9P31274 260 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 SYAP1Q96A49 352 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 LTV1Q96GA3 475 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 DBF4Q9UBU7 674 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 PRR36Q9H6K5 1346 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 OVOS2A0A0J9YW53 1432 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 OVOS2Q6IE36 1432 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 RLBP1P12271 317 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 COL3A1P02461 1466 aaPredicted RBP5.58□□□□□ -1.52
SCN1A-210ENST00000635776 ADGRB2O60241 1585 aa5.58□□□□□ -1.52
SCN1A-210ENST00000635776 ALDH1L1O75891 902 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 FLIIQ13045 1269 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 NPHP3Q7Z494 1330 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 CLASRPQ8N2M8 674 aaKnown RBP5.57□□□□□ -1.52
SCN1A-210ENST00000635776 EYA1Q99502 592 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 C9orf78Q9NZ63 289 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-210ENST00000635776 AOX1Q06278 1338 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 CD163L1Q9NR16 1453 aa5.57□□□□□ -1.52
SCN1A-210ENST00000635776 RBM25P49756 843 aaKnown RBP5.57□□□□□ -1.52
SCN1A-210ENST00000635776 NCAPD2Q15021 1401 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 HYPKQ9NX55 129 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 MTHFSDQ2M296 383 aaKnown RBP5.56□□□□□ -1.52
SCN1A-210ENST00000635776 MCM10Q7L590 875 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 KIF3AQ9Y496 699 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.56□□□□□ -1.523e-7■■■□□ 19
SCN1A-210ENST00000635776 C8orf58Q8NAV2 365 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 RNF20Q5VTR2 975 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 SLKQ9H2G2 1235 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-210ENST00000635776 KDRP35968 1356 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 ZKSCAN1P17029 563 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-210ENST00000635776 ANAPC15P60006 121 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 G3BP1Q13283 466 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCN1A-210ENST00000635776 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 KIF1BPQ96EK5 621 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 NPHP4O75161 1426 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-210ENST00000635776 GOLGA6L3A6NEY3 463 aa5.56□□□□□ -1.52
SCN1A-210ENST00000635776 HSP90B1P14625 803 aaKnown RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 K7ELQ4 463 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 TRIM44Q96DX7 344 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 LRRC7Q96NW7 1537 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 TRIM6-TRIM34B2RNG4 842 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 ATP8B2P98198 1209 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 THUMPD2Q9BTF0 503 aaKnown RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 BTBD11A6QL63 1104 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 IFIT2P09913 472 aaKnown RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 LARP1Q6PKG0 1096 aaKnown RBP5.55□□□□□ -1.52
SCN1A-210ENST00000635776 KRT28Q7Z3Y7 464 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 DNAAF4Q8WXU2 420 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 TTC22Q5TAA0 569 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 DIAPH3Q9NSV4 1193 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 NLRP2Q9NX02 1062 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 IFNL2Q8IZJ0 200 aa5.55□□□□□ -1.52
SCN1A-210ENST00000635776 KCNJ4P48050 445 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 PHF14O94880 888 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms