RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
BRCA1-230ENST00000634433 JCADQ9P266 1359 aa9.16□□□□□ -0.94
BRCA1-230ENST00000634433 HMOX1P09601 288 aa9.16□□□□□ -0.94
BRCA1-230ENST00000634433 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-230ENST00000634433 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
BRCA1-230ENST00000634433 CHD2O14647 1828 aaKnown RBP9.15□□□□□ -0.94
BRCA1-230ENST00000634433 GNAI1P63096 354 aa9.15□□□□□ -0.94
BRCA1-230ENST00000634433 EXOSC9Q06265 439 aaKnown RBP9.15□□□□□ -0.94
BRCA1-230ENST00000634433 FRAT1Q92837 279 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-230ENST00000634433 EIF4A2Q14240 407 aaKnown RBP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 KIF24Q5T7B8 1368 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 SPATA31A6Q5VVP1 1343 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 ZNF772Q68DY9 489 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 BCCIPQ9P287 314 aaKnown RBP eCLIP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 PHF8Q9UPP1 1060 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 AHDC1Q5TGY3 1603 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-230ENST00000634433 SBNO1A3KN83 1393 aa9.14□□□□□ -0.95
BRCA1-230ENST00000634433 KDM2BQ8NHM5 1336 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 ALDH1L2Q3SY69 923 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 TSR2Q969E8 191 aaKnown RBP9.13□□□□□ -0.95
BRCA1-230ENST00000634433 PHACTR3Q96KR7 559 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 PRDM10Q9NQV6 1147 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 FLT4P35916 1363 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 AMPHP49418 695 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 NLRP6P59044 892 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 SMC4Q9NTJ3 1288 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 NALCNQ8IZF0 1738 aa9.13□□□□□ -0.95
BRCA1-230ENST00000634433 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-230ENST00000634433 CLUAP1Q96AJ1 413 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 ARHGEF10O15013 1369 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 TMCO4Q5TGY1 634 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 SULT6B1Q6IMI4 303 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 FTSJ3Q8IY81 847 aaKnown RBP9.12□□□□□ -0.95
BRCA1-230ENST00000634433 MAP3K19Q56UN5 1328 aa9.12□□□□□ -0.95
BRCA1-230ENST00000634433 DZIP1LQ8IYY4 767 aaKnown RBP9.11□□□□□ -0.95
BRCA1-230ENST00000634433 PANK1Q8TE04 598 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 KDM4AO75164 1064 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 ZNF853P0CG23 659 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 HSP90AB2PQ58FF8 381 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 ABTB2Q8N961 1025 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 PRDM16Q9HAZ2 1276 aa9.11□□□□□ -0.95
BRCA1-230ENST00000634433 LAS1LQ9Y4W2 734 aaKnown RBP9.11□□□□□ -0.95
BRCA1-230ENST00000634433 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-230ENST00000634433 SSH1Q8WYL5 1049 aa9.1□□□□□ -0.95
BRCA1-230ENST00000634433 UPF1Q92900 1129 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRCA1-230ENST00000634433 CHMP4BQ9H444 224 aaKnown RBP9.1□□□□□ -0.95
BRCA1-230ENST00000634433 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-230ENST00000634433 PSME1Q06323 249 aa9.1□□□□□ -0.95
BRCA1-230ENST00000634433 MVPQ14764 893 aaKnown RBP9.1□□□□□ -0.95
BRCA1-230ENST00000634433 ATF7IPQ6VMQ6 1270 aa9.1□□□□□ -0.95
BRCA1-230ENST00000634433 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
BRCA1-230ENST00000634433 MSH6P52701 1360 aa9.1□□□□□ -0.95
BRCA1-230ENST00000634433 SOX12O15370 315 aa9.09□□□□□ -0.95
BRCA1-230ENST00000634433 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
BRCA1-230ENST00000634433 TICAM2Q86XR7 235 aa9.09□□□□□ -0.95
BRCA1-230ENST00000634433 ANO8Q9HCE9 1232 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-230ENST00000634433 PROSER2Q86WR7 435 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-230ENST00000634433 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-230ENST00000634433 DDX19BQ9UMR2 479 aa9.09□□□□□ -0.95
BRCA1-230ENST00000634433 TMEM94Q12767 1356 aa9.09□□□□□ -0.95
BRCA1-230ENST00000634433 PDE4AP27815 886 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 KCNH5Q8NCM2 988 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 GAS2L2Q8NHY3 880 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 ARHGAP45Q92619 1136 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 RTL1A6NKG5 1358 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 USP54Q70EL1 1684 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 HTATSF1O43719 755 aaKnown RBP9.08□□□□□ -0.96
BRCA1-230ENST00000634433 ANP32AP39687 249 aaKnown RBP9.08□□□□□ -0.96
BRCA1-230ENST00000634433 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
BRCA1-230ENST00000634433 NOB1Q9ULX3 412 aaKnown RBP9.08□□□□□ -0.96
BRCA1-230ENST00000634433 PIK3C2AO00443 1686 aa9.08□□□□□ -0.96
BRCA1-230ENST00000634433 VAMP4O75379 141 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 RLBP1P12271 317 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 HOXC9P31274 260 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
BRCA1-230ENST00000634433 BACH2Q9BYV9 841 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 MBIPQ9NS73 344 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 KDRP35968 1356 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 C19orf44Q9H6X5 657 aa9.07□□□□□ -0.96
BRCA1-230ENST00000634433 TRIM27P14373 513 aa9.06□□□□□ -0.96
BRCA1-230ENST00000634433 EYA1Q99502 592 aa9.06□□□□□ -0.96
BRCA1-230ENST00000634433 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
BRCA1-230ENST00000634433 RGPD1P0DJD0 1748 aa9.06□□□□□ -0.96
BRCA1-230ENST00000634433 TWISTNBQ3B726 338 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-230ENST00000634433 CHL1O00533 1208 aa9.05□□□□□ -0.96
BRCA1-230ENST00000634433 IGHDP01880 384 aa9.05□□□□□ -0.96
BRCA1-230ENST00000634433 NKX1-1Q15270 411 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-230ENST00000634433 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
BRCA1-230ENST00000634433 ITPRIPQ8IWB1 547 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms