RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 HOXC9P31274 260 aa33.72■■■□□ 2.99
CAPNS1-216ENST00000628306 PNPLA7Q6ZV29 1317 aa33.72■■■□□ 2.99
CAPNS1-216ENST00000628306 SLC27A3Q5K4L6 730 aa33.72■■■□□ 2.99
CAPNS1-216ENST00000628306 DOT1LQ8TEK3 1739 aa33.71■■■□□ 2.99
CAPNS1-216ENST00000628306 MEGF6O75095 1541 aa33.71■■■□□ 2.99
CAPNS1-216ENST00000628306 LY75O60449 1722 aa33.71■■■□□ 2.99
CAPNS1-216ENST00000628306 KCNQ4P56696 695 aa33.7■■■□□ 2.98
CAPNS1-216ENST00000628306 ANKRD36BQ8N2N9 1353 aa33.7■■■□□ 2.98
CAPNS1-216ENST00000628306 ST20-MTHFSA0A0A6YYL1 179 aa33.69■■■□□ 2.98
CAPNS1-216ENST00000628306 PRIM1P49642 420 aaKnown RBP33.68■■■□□ 2.98
CAPNS1-216ENST00000628306 SLC16A10Q8TF71 515 aa33.67■■■□□ 2.98
CAPNS1-216ENST00000628306 COG3Q96JB2 828 aa33.66■■■□□ 2.98
CAPNS1-216ENST00000628306 ZNF316A6NFI3 1004 aaPredicted RBP33.62■■■□□ 2.97
CAPNS1-216ENST00000628306 ZCRB1Q8TBF4 217 aaKnown RBP33.62■■■□□ 2.97
CAPNS1-216ENST00000628306 AMPHP49418 695 aa33.61■■■□□ 2.97
CAPNS1-216ENST00000628306 NBPF6Q5VWK0 638 aa33.6■■■□□ 2.97
CAPNS1-216ENST00000628306 SYTL4Q96C24 671 aaPredicted RBP33.6■■■□□ 2.97
CAPNS1-216ENST00000628306 NBPF4Q96M43 638 aa33.6■■■□□ 2.97
CAPNS1-216ENST00000628306 RTL1A6NKG5 1358 aa33.6■■■□□ 2.97
CAPNS1-216ENST00000628306 RRS1Q15050 365 aaKnown RBP33.59■■■□□ 2.97
CAPNS1-216ENST00000628306 TFCP2L1Q9NZI6 479 aa33.58■■■□□ 2.97
CAPNS1-216ENST00000628306 FYB1O15117 783 aa33.57■■■□□ 2.96
CAPNS1-216ENST00000628306 NLGN2Q8NFZ4 835 aa33.55■■■□□ 2.96
CAPNS1-216ENST00000628306 POLD1P28340 1107 aa33.53■■■□□ 2.96
CAPNS1-216ENST00000628306 GPR162Q16538 588 aa33.53■■■□□ 2.96
CAPNS1-216ENST00000628306 USHBP1Q8N6Y0 703 aa33.53■■■□□ 2.96
CAPNS1-216ENST00000628306 GGNBP2Q9H3C7 697 aa33.52■■■□□ 2.96
CAPNS1-216ENST00000628306 CCNL1Q9UK58 526 aaPredicted RBP33.52■■■□□ 2.96
CAPNS1-216ENST00000628306 COL23A1Q86Y22 540 aaPredicted RBP33.5■■■□□ 2.95
CAPNS1-216ENST00000628306 CGNL1Q0VF96 1302 aa33.49■■■□□ 2.95
CAPNS1-216ENST00000628306 SLC24A1O60721 1099 aa33.48■■■□□ 2.95
CAPNS1-216ENST00000628306 KLHL34Q8N239 644 aa33.48■■■□□ 2.95
CAPNS1-216ENST00000628306 C1QTNF8P60827 252 aa33.47■■■□□ 2.95
CAPNS1-216ENST00000628306 HSP90AB2PQ58FF8 381 aa33.47■■■□□ 2.95
CAPNS1-216ENST00000628306 USP47Q96K76 1375 aa33.46■■■□□ 2.95
CAPNS1-216ENST00000628306 INSRP06213 1382 aa33.46■■■□□ 2.95
CAPNS1-216ENST00000628306 C5P01031 1676 aa33.44■■■□□ 2.94
CAPNS1-216ENST00000628306 YBX3P16989 372 aaKnown RBP eCLIP33.43■■■□□ 2.944e-7■■■□□ 18.5
CAPNS1-216ENST00000628306 TOGARAM1Q9Y4F4 1720 aa33.43■■■□□ 2.94
CAPNS1-216ENST00000628306 KIF20BQ96Q89 1820 aa33.42■■■□□ 2.94
CAPNS1-216ENST00000628306 RAPGEF4Q8WZA2 1011 aa33.42■■■□□ 2.94
CAPNS1-216ENST00000628306 TAF1LQ8IZX4 1826 aa33.41■■■□□ 2.94
CAPNS1-216ENST00000628306 SMG6Q86US8 1419 aaKnown RBP33.41■■■□□ 2.94
CAPNS1-216ENST00000628306 TMF1P82094 1093 aa33.4■■■□□ 2.94
CAPNS1-216ENST00000628306 FLT4P35916 1363 aa33.4■■■□□ 2.94
CAPNS1-216ENST00000628306 CYP27B1O15528 508 aa33.39■■■□□ 2.94
CAPNS1-216ENST00000628306 TATP17735 454 aaPredicted RBP33.39■■■□□ 2.94
CAPNS1-216ENST00000628306 KIF24Q5T7B8 1368 aa33.39■■■□□ 2.94
CAPNS1-216ENST00000628306 CEP350Q5VT06 3117 aa33.39■■■□□ 2.94
CAPNS1-216ENST00000628306 PELP1Q8IZL8 1130 aaKnown RBP33.38■■■□□ 2.93
CAPNS1-216ENST00000628306 PCDH11XQ9BZA7 1347 aa33.38■■■□□ 2.93
CAPNS1-216ENST00000628306 PCDH11YQ9BZA8 1340 aa33.38■■■□□ 2.93
CAPNS1-216ENST00000628306 NCAPD2Q15021 1401 aa33.38■■■□□ 2.93
CAPNS1-216ENST00000628306 SENP3-EIF4A1A0A087X0R7 540 aa33.37■■■□□ 2.93
CAPNS1-216ENST00000628306 MSL1Q68DK7 614 aa33.37■■■□□ 2.93
CAPNS1-216ENST00000628306 CARD14Q9BXL6 1004 aa33.37■■■□□ 2.93
CAPNS1-216ENST00000628306 PKD1L3Q7Z443 1732 aa33.36■■■□□ 2.93
CAPNS1-216ENST00000628306 AMIGO3Q86WK7 504 aa33.36■■■□□ 2.93
CAPNS1-216ENST00000628306 PALLDQ8WX93 1383 aa33.36■■■□□ 2.93
CAPNS1-216ENST00000628306 ITGB4P16144 1822 aa33.35■■■□□ 2.93
CAPNS1-216ENST00000628306 MSH5O43196 834 aa33.34■■■□□ 2.93
CAPNS1-216ENST00000628306 EMILIN1Q9Y6C2 1016 aa33.33■■■□□ 2.93
CAPNS1-216ENST00000628306 C4BP0C0L5 1744 aa33.31■■■□□ 2.92
CAPNS1-216ENST00000628306 MPRIPQ6WCQ1 1025 aa33.31■■■□□ 2.92
CAPNS1-216ENST00000628306 ANKRD26Q9UPS8 1709 aa33.3■■■□□ 2.92
CAPNS1-216ENST00000628306 MAP2P11137 1827 aaKnown RBP33.29■■■□□ 2.92
CAPNS1-216ENST00000628306 UBR3Q6ZT12 1888 aa33.27■■■□□ 2.92
CAPNS1-216ENST00000628306 GRIN3BO60391 1043 aa33.27■■■□□ 2.92
CAPNS1-216ENST00000628306 GIGYF1O75420 1035 aaPredicted RBP33.27■■■□□ 2.92
CAPNS1-216ENST00000628306 NKX1-1Q15270 411 aaPredicted RBP33.27■■■□□ 2.92
CAPNS1-216ENST00000628306 NSD3Q9BZ95 1437 aa33.27■■■□□ 2.92
CAPNS1-216ENST00000628306 PIGBQ92521 554 aa33.26■■■□□ 2.92
CAPNS1-216ENST00000628306 CD2APQ9Y5K6 639 aa33.26■■■□□ 2.92
CAPNS1-216ENST00000628306 SMIM5Q71RC9 77 aa33.25■■■□□ 2.91
CAPNS1-216ENST00000628306 FLAD1Q8NFF5 587 aa33.24■■■□□ 2.91
CAPNS1-216ENST00000628306 CDCA8Q53HL2 280 aa33.22■■■□□ 2.91
CAPNS1-216ENST00000628306 SMARCC1Q92922 1105 aaPredicted RBP33.21■■■□□ 2.91
CAPNS1-216ENST00000628306 WASHC2AQ641Q2 1341 aa33.19■■■□□ 2.9
CAPNS1-216ENST00000628306 ATP10DQ9P241 1426 aa33.18■■■□□ 2.9
CAPNS1-216ENST00000628306 LINC00116Q8NCU8 138 aa33.18■■■□□ 2.9
CAPNS1-216ENST00000628306 EYA1Q99502 592 aa33.18■■■□□ 2.9
CAPNS1-216ENST00000628306 ADCY9O60503 1353 aa33.17■■■□□ 2.9
CAPNS1-216ENST00000628306 AK7Q96M32 723 aa33.17■■■□□ 2.9
CAPNS1-216ENST00000628306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.16■■■□□ 2.9
CAPNS1-216ENST00000628306 HMGB2P26583 209 aaKnown RBP33.16■■■□□ 2.9
CAPNS1-216ENST00000628306 DIEXFQ68CQ4 756 aaKnown RBP33.15■■■□□ 2.9
CAPNS1-216ENST00000628306 LOC102724428A0A0B4J2F2 783 aa33.14■■■□□ 2.9
CAPNS1-216ENST00000628306 SIK1P57059 783 aa33.14■■■□□ 2.9
CAPNS1-216ENST00000628306 EIF4G2P78344 907 aaKnown RBP eCLIP33.14■■■□□ 2.9
CAPNS1-216ENST00000628306 PHF14O94880 888 aa33.13■■■□□ 2.89
CAPNS1-216ENST00000628306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.13■■■□□ 2.89
CAPNS1-216ENST00000628306 SPG7Q9UQ90 795 aa33.13■■■□□ 2.89
CAPNS1-216ENST00000628306 PPM1GO15355 546 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-216ENST00000628306 ITPK1Q13572 414 aa33.12■■■□□ 2.89
CAPNS1-216ENST00000628306 POLKQ9UBT6 870 aa33.12■■■□□ 2.89
CAPNS1-216ENST00000628306 ASAP1Q9ULH1 1129 aa33.12■■■□□ 2.89
CAPNS1-216ENST00000628306 SSFA2P28290 1259 aa33.11■■■□□ 2.89
CAPNS1-216ENST00000628306 PHKG2P15735 406 aa33.09■■■□□ 2.89
CAPNS1-216ENST00000628306 IGSF1Q8N6C5 1336 aa33.09■■■□□ 2.89
CAPNS1-216ENST00000628306 TMOD3Q9NYL9 352 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms