RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 NAA15Q9BXJ9 866 aaKnown RBP10.43□□□□□ -0.74
GABRB3-216ENST00000628124 SREK1Q8WXA9 508 aaKnown RBP10.43□□□□□ -0.74
GABRB3-216ENST00000628124 FAM177BA6PVY3 158 aa10.43□□□□□ -0.74
GABRB3-216ENST00000628124 USO1O60763 962 aaKnown RBP10.43□□□□□ -0.74
GABRB3-216ENST00000628124 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
GABRB3-216ENST00000628124 KIF5CO60282 957 aa10.43□□□□□ -0.74
GABRB3-216ENST00000628124 CETN1Q12798 172 aa10.43□□□□□ -0.74
GABRB3-216ENST00000628124 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 TDO2P48775 406 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 FSD2A1L4K1 749 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 NLRP6P59044 892 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 EHMT1Q9H9B1 1298 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 CTNNA2P26232 953 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 CACNA2D4Q7Z3S7 1137 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 HMOX1P09601 288 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 SEC63Q9UGP8 760 aaKnown RBP10.42□□□□□ -0.74
GABRB3-216ENST00000628124 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
GABRB3-216ENST00000628124 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
GABRB3-216ENST00000628124 CFAP100Q494V2 611 aa10.41□□□□□ -0.74
GABRB3-216ENST00000628124 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-216ENST00000628124 PPP1R1BQ9UD71 204 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-216ENST00000628124 CIZ1Q9ULV3 898 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-216ENST00000628124 SFPQP23246 707 aaKnown RBP eCLIP10.41□□□□□ -0.74
GABRB3-216ENST00000628124 UBE4AQ14139 1066 aa10.41□□□□□ -0.74
GABRB3-216ENST00000628124 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
GABRB3-216ENST00000628124 DRC1Q96MC2 740 aa10.41□□□□□ -0.74
GABRB3-216ENST00000628124 FERMT2Q96AC1 680 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 UQCRHLA0A096LP55 91 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 SPDYE4A6NLX3 237 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 UQCRHP07919 91 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 SPECC1Q5M775 1068 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 CCDC196A0A1B0GTZ2 297 aa10.4□□□□□ -0.74
GABRB3-216ENST00000628124 RBM10P98175 930 aaKnown RBP10.4□□□□□ -0.74
GABRB3-216ENST00000628124 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.75
GABRB3-216ENST00000628124 ACTN2P35609 894 aa10.4□□□□□ -0.75
GABRB3-216ENST00000628124 DHX37Q8IY37 1157 aaKnown RBP10.4□□□□□ -0.75
GABRB3-216ENST00000628124 RAB3IL1Q8TBN0 382 aa10.4□□□□□ -0.75
GABRB3-216ENST00000628124 PKNOX2Q96KN3 472 aa10.4□□□□□ -0.75
GABRB3-216ENST00000628124 CEP126Q9P2H0 1117 aa10.4□□□□□ -0.75
GABRB3-216ENST00000628124 STK3Q13188 491 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 TMEM266Q2M3C6 531 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 PIBF1Q8WXW3 757 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 CTNNBL1Q8WYA6 563 aaPredicted RBP10.39□□□□□ -0.75
GABRB3-216ENST00000628124 SOGA1O94964 1423 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 MAP3K11Q16584 847 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 CALCOCO1Q9P1Z2 691 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 STXBP4Q6ZWJ1 553 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 CUL5Q93034 780 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 TTC21AQ8NDW8 1320 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 USP5P45974 858 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 DAAM2Q86T65 1068 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 KIF18AQ8NI77 898 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 ALS2CR12Q96Q35 445 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 RAI14Q9P0K7 980 aa10.39□□□□□ -0.75
GABRB3-216ENST00000628124 ZWINTO95229 277 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 CABP4P57796 275 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 PTPN14Q15678 1187 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 KIF4BQ2VIQ3 1234 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
GABRB3-216ENST00000628124 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
GABRB3-216ENST00000628124 TICAM2Q86XR7 235 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 CASQ1P31415 396 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 ANO10Q9NW15 660 aa10.38□□□□□ -0.75
GABRB3-216ENST00000628124 IGHMBP2P38935 993 aaKnown RBP10.38□□□□□ -0.75
GABRB3-216ENST00000628124 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
GABRB3-216ENST00000628124 YEATS4O95619 227 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 GRPEL1Q9HAV7 217 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 IKBKGQ9Y6K9 419 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
GABRB3-216ENST00000628124 RNF187Q5TA31 235 aaPredicted RBP10.37□□□□□ -0.75
GABRB3-216ENST00000628124 LRP2BPQ9P2M1 347 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 FBF1Q8TES7 1133 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 PLVAPQ9BX97 442 aa10.37□□□□□ -0.75
GABRB3-216ENST00000628124 NEMFO60524 1076 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 PPP1R14CQ8TAE6 165 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 MACROD2A1Z1Q3 448 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 AIDAQ96BJ3 306 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 GOLGA6L9A6NEM1 432 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 IBSPP21815 317 aaPredicted RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 SCAPERQ9BY12 1400 aa10.36□□□□□ -0.75
GABRB3-216ENST00000628124 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
GABRB3-216ENST00000628124 HMGB1P1B2RPK0 211 aaPredicted RBP10.35□□□□□ -0.75
GABRB3-216ENST00000628124 CTAGE5O15320 804 aa10.35□□□□□ -0.75
GABRB3-216ENST00000628124 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms