RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 DEFB132Q7Z7B7 95 aa25.55■■□□□ 1.68
CNOT9-209ENST00000627282 USHBP1Q8N6Y0 703 aa25.55■■□□□ 1.68
CNOT9-209ENST00000627282 TNS1Q9HBL0 1735 aaKnown RBP25.53■■□□□ 1.68
CNOT9-209ENST00000627282 OVOS2A0A0G2JMS6 1433 aa25.53■■□□□ 1.68
CNOT9-209ENST00000627282 NCAPD2Q15021 1401 aa25.53■■□□□ 1.68
CNOT9-209ENST00000627282 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
CNOT9-209ENST00000627282 TRIM37O94972 964 aa25.52■■□□□ 1.68
CNOT9-209ENST00000627282 BAG6P46379 1132 aa25.52■■□□□ 1.68
CNOT9-209ENST00000627282 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
CNOT9-209ENST00000627282 IL2RBP14784 551 aa25.49■■□□□ 1.67
CNOT9-209ENST00000627282 EXOC5O00471 708 aa25.48■■□□□ 1.67
CNOT9-209ENST00000627282 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
CNOT9-209ENST00000627282 AEBP1Q8IUX7 1158 aa25.47■■□□□ 1.67
CNOT9-209ENST00000627282 BCL9O00512 1426 aa25.46■■□□□ 1.67
CNOT9-209ENST00000627282 U2SURPO15042 1029 aaKnown RBP25.46■■□□□ 1.67
CNOT9-209ENST00000627282 HNRNPUQ00839 825 aaKnown RBP eCLIP25.46■■□□□ 1.67
CNOT9-209ENST00000627282 FAM9BQ8IZU0 186 aa25.46■■□□□ 1.67
CNOT9-209ENST00000627282 MEGF6O75095 1541 aa25.46■■□□□ 1.67
CNOT9-209ENST00000627282 KDRP35968 1356 aa25.45■■□□□ 1.66
CNOT9-209ENST00000627282 EN1Q05925 392 aaPredicted RBP25.45■■□□□ 1.66
CNOT9-209ENST00000627282 SULT6B1Q6IMI4 303 aa25.45■■□□□ 1.66
CNOT9-209ENST00000627282 NUDCQ9Y266 331 aa25.45■■□□□ 1.66
CNOT9-209ENST00000627282 HMOX1P09601 288 aa25.43■■□□□ 1.66
CNOT9-209ENST00000627282 APBA3O96018 575 aa25.42■■□□□ 1.66
CNOT9-209ENST00000627282 RAPGEF4Q8WZA2 1011 aa25.41■■□□□ 1.66
CNOT9-209ENST00000627282 SBF2Q86WG5 1849 aa25.41■■□□□ 1.66
CNOT9-209ENST00000627282 U2AF1L5P0DN76 240 aaPredicted RBP25.41■■□□□ 1.66
CNOT9-209ENST00000627282 U2AF1Q01081 240 aaKnown RBP eCLIP25.41■■□□□ 1.66
CNOT9-209ENST00000627282 CAMKK2Q96RR4 588 aa25.39■■□□□ 1.66
CNOT9-209ENST00000627282 TATP17735 454 aaPredicted RBP25.38■■□□□ 1.65
CNOT9-209ENST00000627282 PNISRQ8TF01 805 aaKnown RBP25.38■■□□□ 1.65
CNOT9-209ENST00000627282 EZH2Q15910 746 aaKnown RBP25.37■■□□□ 1.65
CNOT9-209ENST00000627282 BCL11BQ9C0K0 894 aaPredicted RBP25.37■■□□□ 1.65
CNOT9-209ENST00000627282 RSPH6AQ9H0K4 717 aa25.37■■□□□ 1.65
CNOT9-209ENST00000627282 PTF1AQ7RTS3 328 aa25.34■■□□□ 1.65
CNOT9-209ENST00000627282 FCHSD2O94868 740 aa25.33■■□□□ 1.65
CNOT9-209ENST00000627282 ZCRB1Q8TBF4 217 aaKnown RBP25.33■■□□□ 1.65
CNOT9-209ENST00000627282 PLEKHG2Q9H7P9 1386 aa25.33■■□□□ 1.64
CNOT9-209ENST00000627282 PKD1L3Q7Z443 1732 aa25.32■■□□□ 1.64
CNOT9-209ENST00000627282 PRKAR2BP31323 418 aa25.32■■□□□ 1.64
CNOT9-209ENST00000627282 WDR43Q15061 677 aaKnown RBP eCLIP25.32■■□□□ 1.64
CNOT9-209ENST00000627282 RREB1Q92766 1687 aa25.32■■□□□ 1.64
CNOT9-209ENST00000627282 SHANK3Q9BYB0 1731 aa25.31■■□□□ 1.64
CNOT9-209ENST00000627282 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
CNOT9-209ENST00000627282 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
CNOT9-209ENST00000627282 NHSQ6T4R5 1651 aa25.31■■□□□ 1.64
CNOT9-209ENST00000627282 RGPD3A6NKT7 1758 aaPredicted RBP25.31■■□□□ 1.64
CNOT9-209ENST00000627282 RGPD4Q7Z3J3 1758 aa25.31■■□□□ 1.64
CNOT9-209ENST00000627282 ZBED9Q6R2W3 1325 aa25.31■■□□□ 1.64
CNOT9-209ENST00000627282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.642e-7■□□□□ 10.3
CNOT9-209ENST00000627282 PLSCR1O15162 318 aa25.3■■□□□ 1.64
CNOT9-209ENST00000627282 PHACTR3Q96KR7 559 aa25.29■■□□□ 1.64
CNOT9-209ENST00000627282 KCNQ2O43526 872 aa25.28■■□□□ 1.64
CNOT9-209ENST00000627282 PLEKHF1Q96S99 279 aa25.28■■□□□ 1.64
CNOT9-209ENST00000627282 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
CNOT9-209ENST00000627282 CYP27B1O15528 508 aa25.27■■□□□ 1.64
CNOT9-209ENST00000627282 AMOTQ4VCS5 1084 aa25.27■■□□□ 1.64
CNOT9-209ENST00000627282 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
CNOT9-209ENST00000627282 ACSBG1Q96GR2 724 aa25.27■■□□□ 1.64
CNOT9-209ENST00000627282 SRCAPQ6ZRS2 3230 aa25.27■■□□□ 1.64
CNOT9-209ENST00000627282 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
CNOT9-209ENST00000627282 PCDH11XQ9BZA7 1347 aa25.26■■□□□ 1.63
CNOT9-209ENST00000627282 PCDH11YQ9BZA8 1340 aa25.26■■□□□ 1.63
CNOT9-209ENST00000627282 MTHFSDQ2M296 383 aaKnown RBP25.25■■□□□ 1.63
CNOT9-209ENST00000627282 ZNF530Q6P9A1 599 aaPredicted RBP25.23■■□□□ 1.63
CNOT9-209ENST00000627282 PSDA5PKW4 1024 aaPredicted RBP25.23■■□□□ 1.63
CNOT9-209ENST00000627282 PHKG2P15735 406 aa25.22■■□□□ 1.63
CNOT9-209ENST00000627282 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
CNOT9-209ENST00000627282 PNNQ9H307 717 aaKnown RBP25.21■■□□□ 1.63
CNOT9-209ENST00000627282 BTAF1O14981 1849 aa25.2■■□□□ 1.63
CNOT9-209ENST00000627282 R3HDM1Q15032 1099 aaKnown RBP25.2■■□□□ 1.62
CNOT9-209ENST00000627282 IFNL2Q8IZJ0 200 aa25.2■■□□□ 1.62
CNOT9-209ENST00000627282 PROM2Q8N271 834 aa25.19■■□□□ 1.62
CNOT9-209ENST00000627282 DOT1LQ8TEK3 1739 aa25.19■■□□□ 1.62
CNOT9-209ENST00000627282 GAS2L2Q8NHY3 880 aa25.19■■□□□ 1.62
CNOT9-209ENST00000627282 KAT6BQ8WYB5 2073 aa25.19■■□□□ 1.62
CNOT9-209ENST00000627282 NKX1-1Q15270 411 aaPredicted RBP25.18■■□□□ 1.62
CNOT9-209ENST00000627282 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
CNOT9-209ENST00000627282 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
CNOT9-209ENST00000627282 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
CNOT9-209ENST00000627282 PRIM1P49642 420 aaKnown RBP25.17■■□□□ 1.62
CNOT9-209ENST00000627282 NEFMP07197 916 aa25.16■■□□□ 1.62
CNOT9-209ENST00000627282 TXNRD1Q16881 649 aa25.16■■□□□ 1.62
CNOT9-209ENST00000627282 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
CNOT9-209ENST00000627282 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
CNOT9-209ENST00000627282 SYTL4Q96C24 671 aaPredicted RBP25.15■■□□□ 1.62
CNOT9-209ENST00000627282 KDM6AO15550 1401 aaPredicted RBP25.14■■□□□ 1.61
CNOT9-209ENST00000627282 NFE2L2Q16236 605 aa25.14■■□□□ 1.61
CNOT9-209ENST00000627282 SUPT16HQ9Y5B9 1047 aaKnown RBP25.13■■□□□ 1.61
CNOT9-209ENST00000627282 MAP3K5Q99683 1374 aa25.13■■□□□ 1.61
CNOT9-209ENST00000627282 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
CNOT9-209ENST00000627282 TOGARAM1Q9Y4F4 1720 aa25.12■■□□□ 1.61
CNOT9-209ENST00000627282 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
CNOT9-209ENST00000627282 DCAF5Q96JK2 942 aa25.12■■□□□ 1.61
CNOT9-209ENST00000627282 ANO8Q9HCE9 1232 aaPredicted RBP25.12■■□□□ 1.61
CNOT9-209ENST00000627282 GNAT3A8MTJ3 354 aa25.11■■□□□ 1.61
CNOT9-209ENST00000627282 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
CNOT9-209ENST00000627282 APAF1O14727 1248 aa25.1■■□□□ 1.61
CNOT9-209ENST00000627282 RRP7AQ9Y3A4 280 aaKnown RBP25.1■■□□□ 1.61
CNOT9-209ENST00000627282 LGR6Q9HBX8 967 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms