RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
PTP4A1-206ENST00000627002 ERBB3P21860 1342 aa9.81□□□□□ -0.84
PTP4A1-206ENST00000627002 ROBO1Q9Y6N7 1651 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 KIAA0232Q92628 1395 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 HTATSF1O43719 755 aaKnown RBP9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 CT47B1P0C2W7 299 aaPredicted RBP9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 FKBP8Q14318 412 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 NBPF6Q5VWK0 638 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 POTEHQ6S545 545 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 NBPF4Q96M43 638 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 NCAPD2Q15021 1401 aa9.8□□□□□ -0.84
PTP4A1-206ENST00000627002 CRYBG1Q9Y4K1 1723 aa9.79□□□□□ -0.84
PTP4A1-206ENST00000627002 PLEKHG2Q9H7P9 1386 aa9.79□□□□□ -0.84
PTP4A1-206ENST00000627002 PRDM11Q9NQV5 511 aa9.79□□□□□ -0.84
PTP4A1-206ENST00000627002 IFT57Q9NWB7 429 aa9.79□□□□□ -0.84
PTP4A1-206ENST00000627002 SPATA31A6Q5VVP1 1343 aa9.79□□□□□ -0.84
PTP4A1-206ENST00000627002 CSB-PGBD3P0DP91 1061 aa9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 GNAI1P63096 354 aa9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 USHBP1Q8N6Y0 703 aa9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 RTF1Q92541 710 aaKnown RBP9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 FANCIQ9NVI1 1328 aa9.78□□□□□ -0.84
PTP4A1-206ENST00000627002 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
PTP4A1-206ENST00000627002 PLEKHO1Q53GL0 409 aaPredicted RBP9.77□□□□□ -0.85
PTP4A1-206ENST00000627002 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
PTP4A1-206ENST00000627002 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.852e-8■□□□□ 9.8
PTP4A1-206ENST00000627002 NLRP2Q9NX02 1062 aa9.77□□□□□ -0.85
PTP4A1-206ENST00000627002 CAMTA1Q9Y6Y1 1673 aa9.77□□□□□ -0.85
PTP4A1-206ENST00000627002 MAP3K5Q99683 1374 aa9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 COL22A1Q8NFW1 1626 aaPredicted RBP9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 ZNF853P0CG23 659 aa9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 RXRBP28702 533 aa9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
PTP4A1-206ENST00000627002 COL18A1P39060 1754 aa9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 LMO7Q8WWI1 1683 aa9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 FAM83GA6ND36 823 aa9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 TATP17735 454 aaPredicted RBP9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 RAPGEF4Q8WZA2 1011 aa9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 LAS1LQ9Y4W2 734 aaKnown RBP9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 WDR17Q8IZU2 1322 aa9.75□□□□□ -0.85
PTP4A1-206ENST00000627002 FAM208AQ9UK61 1670 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 ABCA3Q99758 1704 aa9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 EXOSC9Q06265 439 aaKnown RBP9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 DCTN1Q14203 1278 aa9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 AKAP4Q5JQC9 854 aa9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 MCM10Q7L590 875 aa9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.851e-7■■■■■ 29.6
PTP4A1-206ENST00000627002 COL16A1Q07092 1604 aaPredicted RBP9.74□□□□□ -0.85
PTP4A1-206ENST00000627002 CRB1P82279 1406 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 PHLPP1O60346 1717 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 COL5A2P05997 1499 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 CHL1O00533 1208 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 RARSP54136 660 aaKnown RBP9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 EVA1CP58658 441 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 C1orf141Q5JVX7 400 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 ZNF530Q6P9A1 599 aaPredicted RBP9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 AKT1S1Q96B36 256 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 BABAM1Q9NWV8 329 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 SPG7Q9UQ90 795 aa9.73□□□□□ -0.85
PTP4A1-206ENST00000627002 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
PTP4A1-206ENST00000627002 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
PTP4A1-206ENST00000627002 OVOS2A0A0G2JMS6 1433 aa9.72□□□□□ -0.85
PTP4A1-206ENST00000627002 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 ALDH1L2Q3SY69 923 aa9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.86
PTP4A1-206ENST00000627002 COL14A1Q05707 1796 aaKnown RBP9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 BCAR3O75815 825 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 TAF7Q15545 349 aaPredicted RBP9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 BTG4Q9NY30 223 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 TSPYL4Q9UJ04 414 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 LRRC37A3O60309 1634 aa9.7□□□□□ -0.86
PTP4A1-206ENST00000627002 RNMTO43148 476 aaKnown RBP9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 PLIN1O60240 522 aa9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 MEGF6O75095 1541 aa9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 MS4A1P11836 297 aa9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 PDE3AQ14432 1141 aa9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 TWISTNBQ3B726 338 aaPredicted RBP9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
PTP4A1-206ENST00000627002 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 RGPD2P0DJD1 1756 aa9.68□□□□□ -0.86
PTP4A1-206ENST00000627002 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms