RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GAS2L2Q8NHY3 880 aa25■■□□□ 1.59
PCDHB11-202ENST00000624887 CHMP4BQ9H444 224 aaKnown RBP25■■□□□ 1.59
PCDHB11-202ENST00000624887 STRCQ7RTU9 1775 aa24.99■■□□□ 1.59
PCDHB11-202ENST00000624887 FOXO3O43524 673 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 PSME1Q06323 249 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 DDRGK1Q96HY6 314 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 C19orf44Q9H6X5 657 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 LTN1O94822 1766 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 ZBTB7BO15156 539 aaPredicted RBP24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 RTF1Q92541 710 aaKnown RBP24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 API5Q9BZZ5 524 aaKnown RBP24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
PCDHB11-202ENST00000624887 NFAT5O94916 1531 aa24.97■■□□□ 1.59
PCDHB11-202ENST00000624887 SMC5Q8IY18 1101 aa24.97■■□□□ 1.59
PCDHB11-202ENST00000624887 NCOA3Q9Y6Q9 1424 aa24.96■■□□□ 1.59
PCDHB11-202ENST00000624887 HTATSF1O43719 755 aaKnown RBP24.96■■□□□ 1.59
PCDHB11-202ENST00000624887 TMEM94Q12767 1356 aa24.96■■□□□ 1.59
PCDHB11-202ENST00000624887 KRT24Q2M2I5 525 aa24.94■■□□□ 1.58
PCDHB11-202ENST00000624887 IP6K1Q92551 441 aa24.93■■□□□ 1.58
PCDHB11-202ENST00000624887 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
PCDHB11-202ENST00000624887 LRRC37A3O60309 1634 aa24.92■■□□□ 1.58
PCDHB11-202ENST00000624887 PHRF1Q9P1Y6 1649 aaKnown RBP24.92■■□□□ 1.58
PCDHB11-202ENST00000624887 ORAI2Q96SN7 254 aa24.91■■□□□ 1.58
PCDHB11-202ENST00000624887 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
PCDHB11-202ENST00000624887 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
PCDHB11-202ENST00000624887 DCCP43146 1447 aa24.9■■□□□ 1.58
PCDHB11-202ENST00000624887 C1orf167Q5SNV9 1468 aa24.89■■□□□ 1.57
PCDHB11-202ENST00000624887 GNAT3A8MTJ3 354 aa24.89■■□□□ 1.57
PCDHB11-202ENST00000624887 ATF3P18847 181 aa24.88■■□□□ 1.57
PCDHB11-202ENST00000624887 MIS18AQ9NYP9 233 aa24.87■■□□□ 1.57
PCDHB11-202ENST00000624887 PTPRCP08575 1304 aa24.87■■□□□ 1.57
PCDHB11-202ENST00000624887 MAP3K5Q99683 1374 aa24.87■■□□□ 1.57
PCDHB11-202ENST00000624887 RGS12O14924 1447 aa24.87■■□□□ 1.57
PCDHB11-202ENST00000624887 INTS3Q68E01 1043 aaKnown RBP24.86■■□□□ 1.57
PCDHB11-202ENST00000624887 USP19O94966 1318 aa24.85■■□□□ 1.57
PCDHB11-202ENST00000624887 NUCB1Q02818 461 aa24.85■■□□□ 1.57
PCDHB11-202ENST00000624887 SLIT3O75094 1523 aa24.85■■□□□ 1.57
PCDHB11-202ENST00000624887 MSH6P52701 1360 aa24.85■■□□□ 1.57
PCDHB11-202ENST00000624887 KIF1AQ12756 1690 aa24.85■■□□□ 1.57
PCDHB11-202ENST00000624887 SEC24BO95487 1268 aa24.84■■□□□ 1.57
PCDHB11-202ENST00000624887 TRPM3Q9HCF6 1732 aaPredicted RBP24.84■■□□□ 1.57
PCDHB11-202ENST00000624887 MST1RQ04912 1400 aa24.84■■□□□ 1.57
PCDHB11-202ENST00000624887 GCC1Q96CN9 775 aa24.84■■□□□ 1.57
PCDHB11-202ENST00000624887 CADPS2Q86UW7 1296 aa24.83■■□□□ 1.57
PCDHB11-202ENST00000624887 C1orf115Q9H7X2 142 aa24.83■■□□□ 1.57
PCDHB11-202ENST00000624887 USHBP1Q8N6Y0 703 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 GCP02774 474 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 NBPF6Q5VWK0 638 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 IL17REQ8NFR9 667 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 NBPF4Q96M43 638 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 BABAM1Q9NWV8 329 aa24.82■■□□□ 1.56
PCDHB11-202ENST00000624887 ZNF335Q9H4Z2 1342 aaPredicted RBP24.81■■□□□ 1.56
PCDHB11-202ENST00000624887 SIRT2Q8IXJ6 389 aa24.81■■□□□ 1.56
PCDHB11-202ENST00000624887 SLC4A2P04920 1241 aa24.8■■□□□ 1.56
PCDHB11-202ENST00000624887 XPCQ01831 940 aaPredicted RBP24.8■■□□□ 1.56
PCDHB11-202ENST00000624887 CHD1LQ86WJ1 897 aa24.8■■□□□ 1.56
PCDHB11-202ENST00000624887 ARHGEF25Q86VW2 580 aa24.8■■□□□ 1.56
PCDHB11-202ENST00000624887 KRT28Q7Z3Y7 464 aa24.78■■□□□ 1.56
PCDHB11-202ENST00000624887 SOS1Q07889 1333 aaPredicted RBP24.78■■□□□ 1.56
PCDHB11-202ENST00000624887 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
PCDHB11-202ENST00000624887 RGPD2P0DJD1 1756 aa24.77■■□□□ 1.56
PCDHB11-202ENST00000624887 XIRP1Q702N8 1843 aaKnown RBP24.77■■□□□ 1.56
PCDHB11-202ENST00000624887 LNPKQ9C0E8 428 aa24.76■■□□□ 1.55
PCDHB11-202ENST00000624887 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
PCDHB11-202ENST00000624887 CEMIPQ8WUJ3 1361 aa24.75■■□□□ 1.55
PCDHB11-202ENST00000624887 UPF2Q9HAU5 1272 aaKnown RBP24.75■■□□□ 1.55
PCDHB11-202ENST00000624887 NCAPD2Q15021 1401 aa24.75■■□□□ 1.55
PCDHB11-202ENST00000624887 DAXXQ9UER7 740 aaPredicted RBP24.74■■□□□ 1.55
PCDHB11-202ENST00000624887 ANKRD45Q5TZF3 282 aa24.74■■□□□ 1.55
PCDHB11-202ENST00000624887 LMOD2Q6P5Q4 547 aa24.74■■□□□ 1.55
PCDHB11-202ENST00000624887 FAM208AQ9UK61 1670 aaKnown RBP24.73■■□□□ 1.55
PCDHB11-202ENST00000624887 STK31Q9BXU1 1019 aa24.73■■□□□ 1.55
PCDHB11-202ENST00000624887 CCDC30Q5VVM6 783 aa24.73■■□□□ 1.55
PCDHB11-202ENST00000624887 G2E3Q7L622 706 aa24.73■■□□□ 1.55
PCDHB11-202ENST00000624887 MED1Q15648 1581 aaPredicted RBP24.72■■□□□ 1.55
PCDHB11-202ENST00000624887 ALS2Q96Q42 1657 aa24.72■■□□□ 1.55
PCDHB11-202ENST00000624887 CACNA1FO60840 1977 aa24.72■■□□□ 1.55
PCDHB11-202ENST00000624887 LRRC59Q96AG4 307 aaKnown RBP24.72■■□□□ 1.55
PCDHB11-202ENST00000624887 ATP10DQ9P241 1426 aa24.72■■□□□ 1.55
PCDHB11-202ENST00000624887 TBC1D32Q96NH3 1257 aa24.71■■□□□ 1.55
PCDHB11-202ENST00000624887 LMO7Q8WWI1 1683 aa24.71■■□□□ 1.55
PCDHB11-202ENST00000624887 ANKRD44Q8N8A2 993 aa24.71■■□□□ 1.55
PCDHB11-202ENST00000624887 SLC4A3P48751 1232 aa24.7■■□□□ 1.54
PCDHB11-202ENST00000624887 NBR1Q14596 966 aa24.7■■□□□ 1.54
PCDHB11-202ENST00000624887 RPAP2Q8IXW5 612 aaPredicted RBP24.7■■□□□ 1.54
PCDHB11-202ENST00000624887 CAMTA1Q9Y6Y1 1673 aa24.7■■□□□ 1.54
PCDHB11-202ENST00000624887 CCT4P50991 539 aaKnown RBP24.69■■□□□ 1.54
PCDHB11-202ENST00000624887 PLEKHO1Q53GL0 409 aaPredicted RBP24.69■■□□□ 1.54
PCDHB11-202ENST00000624887 ANKRD24Q8TF21 1146 aa24.69■■□□□ 1.54
PCDHB11-202ENST00000624887 DCTPP1Q9H773 170 aa24.69■■□□□ 1.54
PCDHB11-202ENST00000624887 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
PCDHB11-202ENST00000624887 AKAP4Q5JQC9 854 aa24.68■■□□□ 1.54
PCDHB11-202ENST00000624887 MEIS3Q99687 375 aa24.67■■□□□ 1.54
PCDHB11-202ENST00000624887 NPHP3Q7Z494 1330 aa24.67■■□□□ 1.54
PCDHB11-202ENST00000624887 CEP85Q6P2H3 762 aa24.67■■□□□ 1.54
PCDHB11-202ENST00000624887 FLIIQ13045 1269 aa24.66■■□□□ 1.54
PCDHB11-202ENST00000624887 BMP2KLQ5H9B9 411 aa24.66■■□□□ 1.54
PCDHB11-202ENST00000624887 F6X3S4 739 aa24.65■■□□□ 1.54
PCDHB11-202ENST00000624887 PLEKHG5O94827 1062 aa24.65■■□□□ 1.54
PCDHB11-202ENST00000624887 ZNF530Q6P9A1 599 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms