RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 PIBF1Q8WXW3 757 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 MPHOSPH8Q99549 860 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 RRBP1Q9P2E9 1410 aaKnown RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 CCDC18Q5T9S5 1454 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 UQCRHLA0A096LP55 91 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 ST20-MTHFSA0A0A6YYL1 179 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 SLU7O95391 586 aaKnown RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 UQCRHP07919 91 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 HMOX1P09601 288 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 PDIA4P13667 645 aaKnown RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 PLEKHO1Q53GL0 409 aaPredicted RBP4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 GAS2L2Q8NHY3 880 aa4.72□□□□□ -1.65
ANKRD28-215ENST00000624145 KIF2AO00139 706 aaPredicted RBP4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 FGFR1OPO95684 399 aaKnown RBP4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 HMGB2P26583 209 aaKnown RBP4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 PPP1R14CQ8TAE6 165 aa4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 SPATA32Q96LK8 384 aa4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 EHMT1Q9H9B1 1298 aa4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 ZNF287Q9HBT7 754 aa4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 FANCIQ9NVI1 1328 aa4.71□□□□□ -1.65
ANKRD28-215ENST00000624145 GPRASP1Q5JY77 1395 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 ZSCAN12O43309 604 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 CTNNA3Q9UI47 895 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 TMCO5BA8MYB1 307 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 KIF5CO60282 957 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 PAXIP1Q6ZW49 1069 aaPredicted RBP4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 UBA5Q9GZZ9 404 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 NUP62CLQ9H1M0 184 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 KIF20AO95235 890 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 MYCNP04198 464 aaPredicted RBP4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 CASQ1P31415 396 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 LMAN1P49257 510 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 CFAP100Q494V2 611 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 LARP1BQ659C4 914 aaKnown RBP4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 RAI14Q9P0K7 980 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 SERPINA10Q9UK55 444 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 USO1O60763 962 aaKnown RBP4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 GNAI2P04899 355 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 PAFAH1B1P43034 410 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 SPECC1Q5M775 1068 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 RGS22Q8NE09 1264 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 DDX12PQ92771 950 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 IKBKGQ9Y6K9 419 aa4.71□□□□□ -1.66
ANKRD28-215ENST00000624145 RB1CC1Q8TDY2 1594 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 ACTN2P35609 894 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 ARL1P40616 181 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CUL5Q93034 780 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 NAP1L3Q99457 506 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 NOL3O60936 208 aaKnown RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CETN1Q12798 172 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 SEPT6Q14141 434 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 FBF1Q8TES7 1133 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 RAB34Q9BZG1 259 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 ANAPC4Q9UJX5 808 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 NDC80O14777 642 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 TATP17735 454 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 FILIP1Q7Z7B0 1213 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CCDC83Q8IWF9 413 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CRACR2BQ8N4Y2 399 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 TMEM266Q2M3C6 531 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 BBXQ8WY36 941 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 ZSCAN31Q96LW9 406 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 PPP6R1Q9UPN7 881 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 POLR3GO15318 223 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CA8P35219 290 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 CBX1P83916 185 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 KRT32Q14532 448 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 BLOC1S2Q6QNY1 142 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 GCC1Q96CN9 775 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 ALS2CR12Q96Q35 445 aa4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 PHAXQ9H814 394 aaKnown RBP4.7□□□□□ -1.66
ANKRD28-215ENST00000624145 FKBP4Q02790 459 aaKnown RBP eCLIP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 TTLL12Q14166 644 aaPredicted RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 WDR78Q5VTH9 848 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 GTPBP4Q9BZE4 634 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 STRN4Q9NRL3 753 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 POTEB2H3BUK9 544 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 CABP4P57796 275 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 KIF4BQ2VIQ3 1234 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 TDRD12Q587J7 1177 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 NUTM2GQ5VZR2 741 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 DDX46Q7L014 1031 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 APBB1IPQ7Z5R6 666 aaPredicted RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 PLCD3Q8N3E9 789 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 LRP2BPQ9P2M1 347 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 SFPQP23246 707 aaKnown RBP eCLIP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 TPD52P55327 224 aaPredicted RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 NLRP6P59044 892 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 MXRA7P84157 204 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 HLTFQ14527 1009 aaKnown RBP eCLIP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 ZNF354CQ86Y25 554 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 SIL1Q9H173 461 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 PDRG1Q9NUG6 133 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 DHX57Q6P158 1386 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 USP47Q96K76 1375 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 TTC21AQ8NDW8 1320 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 TNNT1P13805 278 aa4.69□□□□□ -1.66
ANKRD28-215ENST00000624145 IGHMBP2P38935 993 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms