RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 BMP2KLQ5H9B9 411 aa15□□□□□ -0.01
TP53-227ENST00000622645 INTS3Q68E01 1043 aaKnown RBP15□□□□□ -0.01
TP53-227ENST00000622645 RGPD1P0DJD0 1748 aa14.99□□□□□ -0.01
TP53-227ENST00000622645 RGPD8O14715 1765 aaPredicted RBP14.99□□□□□ -0.01
TP53-227ENST00000622645 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
TP53-227ENST00000622645 KIAA0232Q92628 1395 aa14.99□□□□□ -0.01
TP53-227ENST00000622645 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
TP53-227ENST00000622645 RGS12O14924 1447 aa14.98□□□□□ -0.01
TP53-227ENST00000622645 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
TP53-227ENST00000622645 TSPYL4Q9UJ04 414 aa14.98□□□□□ -0.01
TP53-227ENST00000622645 RBM33Q96EV2 1170 aaKnown RBP14.97□□□□□ -0.01
TP53-227ENST00000622645 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
TP53-227ENST00000622645 KDRP35968 1356 aa14.97□□□□□ -0.01
TP53-227ENST00000622645 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
TP53-227ENST00000622645 CEP170BQ9Y4F5 1589 aaPredicted RBP14.96□□□□□ -0.01
TP53-227ENST00000622645 KIF24Q5T7B8 1368 aa14.96□□□□□ -0.01
TP53-227ENST00000622645 RIMS1Q86UR5 1692 aaKnown RBP14.96□□□□□ -0.01
TP53-227ENST00000622645 ABTB2Q8N961 1025 aa14.96□□□□□ -0.02
TP53-227ENST00000622645 DCTPP1Q9H773 170 aa14.96□□□□□ -0.02
TP53-227ENST00000622645 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
TP53-227ENST00000622645 G2E3Q7L622 706 aa14.95□□□□□ -0.02
TP53-227ENST00000622645 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
TP53-227ENST00000622645 MEIS3Q99687 375 aa14.95□□□□□ -0.02
TP53-227ENST00000622645 PIK3C2AO00443 1686 aa14.95□□□□□ -0.02
TP53-227ENST00000622645 PTPRCP08575 1304 aa14.95□□□□□ -0.02
TP53-227ENST00000622645 HOXC9P31274 260 aa14.95□□□□□ -0.02
TP53-227ENST00000622645 RBM25P49756 843 aaKnown RBP14.95□□□□□ -0.02
TP53-227ENST00000622645 MSH6P52701 1360 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 TBC1D9Q6ZT07 1266 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 C14orf37Q86TY3 774 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
TP53-227ENST00000622645 GAS2L2Q8NHY3 880 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 F6X3S4 739 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
TP53-227ENST00000622645 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
TP53-227ENST00000622645 SLC4A10Q6U841 1118 aa14.93□□□□□ -0.02
TP53-227ENST00000622645 ATP10DQ9P241 1426 aa14.93□□□□□ -0.02
TP53-227ENST00000622645 PLEKHM2Q8IWE5 1019 aa14.93□□□□□ -0.02
TP53-227ENST00000622645 IL27Q8NEV9 243 aa14.93□□□□□ -0.02
TP53-227ENST00000622645 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
TP53-227ENST00000622645 APBB1O00213 710 aa14.92□□□□□ -0.02
TP53-227ENST00000622645 GSPT1P15170 499 aaKnown RBP14.92□□□□□ -0.02
TP53-227ENST00000622645 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
TP53-227ENST00000622645 RTL1A6NKG5 1358 aa14.92□□□□□ -0.02
TP53-227ENST00000622645 FMN2Q9NZ56 1722 aa14.92□□□□□ -0.02
TP53-227ENST00000622645 RPAP2Q8IXW5 612 aaPredicted RBP14.92□□□□□ -0.02
TP53-227ENST00000622645 HSCBQ8IWL3 235 aa14.91□□□□□ -0.02
TP53-227ENST00000622645 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
TP53-227ENST00000622645 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
TP53-227ENST00000622645 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
TP53-227ENST00000622645 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
TP53-227ENST00000622645 SMARCA5O60264 1052 aaPredicted RBP14.9□□□□□ -0.02
TP53-227ENST00000622645 KIF2CQ99661 725 aa14.9□□□□□ -0.02
TP53-227ENST00000622645 IL17REQ8NFR9 667 aa14.89□□□□□ -0.03
TP53-227ENST00000622645 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
TP53-227ENST00000622645 HTATSF1O43719 755 aaKnown RBP14.88□□□□□ -0.03
TP53-227ENST00000622645 CDC45O75419 566 aa14.88□□□□□ -0.03
TP53-227ENST00000622645 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
TP53-227ENST00000622645 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
TP53-227ENST00000622645 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
TP53-227ENST00000622645 CHMP5Q9NZZ3 219 aa14.87□□□□□ -0.03
TP53-227ENST00000622645 SNX21Q969T3 373 aa14.87□□□□□ -0.03
TP53-227ENST00000622645 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
TP53-227ENST00000622645 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
TP53-227ENST00000622645 CD2BP2O95400 341 aaKnown RBP14.86□□□□□ -0.03
TP53-227ENST00000622645 CCT4P50991 539 aaKnown RBP14.86□□□□□ -0.03
TP53-227ENST00000622645 FLIIQ13045 1269 aa14.86□□□□□ -0.03
TP53-227ENST00000622645 FKBP5Q13451 457 aaPredicted RBP14.86□□□□□ -0.03
TP53-227ENST00000622645 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
TP53-227ENST00000622645 MARF1Q9Y4F3 1742 aaKnown RBP14.85□□□□□ -0.03
TP53-227ENST00000622645 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 ESCO1Q5FWF5 840 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 CCDC30Q5VVM6 783 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
TP53-227ENST00000622645 TAF7Q15545 349 aaPredicted RBP14.85□□□□□ -0.03
TP53-227ENST00000622645 PSME1Q06323 249 aa14.84□□□□□ -0.03
TP53-227ENST00000622645 MCM4P33991 863 aa14.84□□□□□ -0.03
TP53-227ENST00000622645 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
TP53-227ENST00000622645 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
TP53-227ENST00000622645 HSP90AB1P08238 724 aaKnown RBP14.83□□□□□ -0.03
TP53-227ENST00000622645 SDSP20132 328 aa14.83□□□□□ -0.03
TP53-227ENST00000622645 HMMRO75330 724 aa14.83□□□□□ -0.04
TP53-227ENST00000622645 IP6K1Q92551 441 aa14.83□□□□□ -0.04
TP53-227ENST00000622645 GNAI2P04899 355 aa14.82□□□□□ -0.04
TP53-227ENST00000622645 DDIT3P35638 169 aa14.82□□□□□ -0.04
TP53-227ENST00000622645 EXOC6BQ9Y2D4 811 aa14.82□□□□□ -0.04
TP53-227ENST00000622645 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
TP53-227ENST00000622645 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
TP53-227ENST00000622645 XPCQ01831 940 aaPredicted RBP14.81□□□□□ -0.04
TP53-227ENST00000622645 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
TP53-227ENST00000622645 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
TP53-227ENST00000622645 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
TP53-227ENST00000622645 LRRC37A3O60309 1634 aa14.8□□□□□ -0.04
TP53-227ENST00000622645 HDGFL1Q5TGJ6 251 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 ORAI2Q96SN7 254 aa14.79□□□□□ -0.04
TP53-227ENST00000622645 PHAXQ9H814 394 aaKnown RBP14.79□□□□□ -0.04
TP53-227ENST00000622645 K7ELQ4 463 aaPredicted RBP14.79□□□□□ -0.04
TP53-227ENST00000622645 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms