RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 KIF24Q5T7B8 1368 aa22.04■■□□□ 1.12
TRA2A-212ENST00000621813 HAP1P54257 671 aaPredicted RBP22.03■■□□□ 1.12
TRA2A-212ENST00000621813 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
TRA2A-212ENST00000621813 TMEM57Q8N5G2 664 aa22.02■■□□□ 1.12
TRA2A-212ENST00000621813 MAP3K19Q56UN5 1328 aa22.02■■□□□ 1.12
TRA2A-212ENST00000621813 FRAT2O75474 233 aaPredicted RBP22.02■■□□□ 1.11
TRA2A-212ENST00000621813 MARF1Q9Y4F3 1742 aaKnown RBP22.01■■□□□ 1.11
TRA2A-212ENST00000621813 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
TRA2A-212ENST00000621813 AEBP1Q8IUX7 1158 aa22■■□□□ 1.11
TRA2A-212ENST00000621813 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
TRA2A-212ENST00000621813 ZBTB40Q9NUA8 1239 aa22■■□□□ 1.11
TRA2A-212ENST00000621813 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
TRA2A-212ENST00000621813 KDRP35968 1356 aa21.99■■□□□ 1.11
TRA2A-212ENST00000621813 SMAP1Q8IYB5 467 aaPredicted RBP21.98■■□□□ 1.11
TRA2A-212ENST00000621813 FAM83GA6ND36 823 aa21.97■■□□□ 1.11
TRA2A-212ENST00000621813 TSPYL6Q8N831 410 aa21.97■■□□□ 1.11
TRA2A-212ENST00000621813 AMPHP49418 695 aa21.96■■□□□ 1.11
TRA2A-212ENST00000621813 KIAA0232Q92628 1395 aa21.95■■□□□ 1.1
TRA2A-212ENST00000621813 NLRP6P59044 892 aa21.95■■□□□ 1.1
TRA2A-212ENST00000621813 IGSF1Q8N6C5 1336 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 ABCC4O15439 1325 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 CHL1O00533 1208 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 SOX12O15370 315 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 SMC5Q8IY18 1101 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 C8orf58Q8NAV2 365 aa21.94■■□□□ 1.1
TRA2A-212ENST00000621813 API5Q9BZZ5 524 aaKnown RBP21.94■■□□□ 1.1
TRA2A-212ENST00000621813 DCTN1Q14203 1278 aa21.93■■□□□ 1.1
TRA2A-212ENST00000621813 ADGRL3Q9HAR2 1447 aa21.93■■□□□ 1.1
TRA2A-212ENST00000621813 RTL1A6NKG5 1358 aa21.91■■□□□ 1.1
TRA2A-212ENST00000621813 KDM4FA0A1W2PPD8 638 aa21.91■■□□□ 1.1
TRA2A-212ENST00000621813 PHF8Q9UPP1 1060 aa21.91■■□□□ 1.1
TRA2A-212ENST00000621813 ELL2O00472 640 aaPredicted RBP21.9■■□□□ 1.1
TRA2A-212ENST00000621813 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
TRA2A-212ENST00000621813 CRB1P82279 1406 aa21.9■■□□□ 1.1
TRA2A-212ENST00000621813 ZBTB7BO15156 539 aaPredicted RBP21.9■■□□□ 1.1
TRA2A-212ENST00000621813 TERF1P54274 439 aa21.9■■□□□ 1.1
TRA2A-212ENST00000621813 ABTB2Q8N961 1025 aa21.9■■□□□ 1.1
TRA2A-212ENST00000621813 LTN1O94822 1766 aa21.89■■□□□ 1.1
TRA2A-212ENST00000621813 NPHP4O75161 1426 aaPredicted RBP21.89■■□□□ 1.09
TRA2A-212ENST00000621813 RTF1Q92541 710 aaKnown RBP21.89■■□□□ 1.09
TRA2A-212ENST00000621813 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
TRA2A-212ENST00000621813 EYA1Q99502 592 aa21.88■■□□□ 1.09
TRA2A-212ENST00000621813 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
TRA2A-212ENST00000621813 HOXC9P31274 260 aa21.88■■□□□ 1.09
TRA2A-212ENST00000621813 MCM10Q7L590 875 aa21.88■■□□□ 1.09
TRA2A-212ENST00000621813 LRRC37A3O60309 1634 aa21.87■■□□□ 1.09
TRA2A-212ENST00000621813 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
TRA2A-212ENST00000621813 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
TRA2A-212ENST00000621813 BBXQ8WY36 941 aaPredicted RBP21.86■■□□□ 1.09
TRA2A-212ENST00000621813 UPF2Q9HAU5 1272 aaKnown RBP21.86■■□□□ 1.09
TRA2A-212ENST00000621813 NAP1L2Q9ULW6 460 aaPredicted RBP21.86■■□□□ 1.09
TRA2A-212ENST00000621813 FSD2A1L4K1 749 aa21.86■■□□□ 1.09
TRA2A-212ENST00000621813 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
TRA2A-212ENST00000621813 UTP14CQ5TAP6 766 aaKnown RBP21.86■■□□□ 1.09
TRA2A-212ENST00000621813 PHRF1Q9P1Y6 1649 aaKnown RBP21.85■■□□□ 1.09
TRA2A-212ENST00000621813 IPO4Q8TEX9 1081 aaKnown RBP21.85■■□□□ 1.09
TRA2A-212ENST00000621813 GCC1Q96CN9 775 aa21.84■■□□□ 1.09
TRA2A-212ENST00000621813 NUCB1Q02818 461 aa21.84■■□□□ 1.09
TRA2A-212ENST00000621813 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
TRA2A-212ENST00000621813 PTPRCP08575 1304 aa21.84■■□□□ 1.09
TRA2A-212ENST00000621813 ESPNB1AK53 854 aa21.83■■□□□ 1.09
TRA2A-212ENST00000621813 USP19O94966 1318 aa21.83■■□□□ 1.09
TRA2A-212ENST00000621813 NFAT5O94916 1531 aa21.82■■□□□ 1.08
TRA2A-212ENST00000621813 XRCC6P12956 609 aaKnown RBP eCLIP21.82■■□□□ 1.084e-7■□□□□ 9.8
TRA2A-212ENST00000621813 INTS3Q68E01 1043 aaKnown RBP21.81■■□□□ 1.08
TRA2A-212ENST00000621813 NUTM2GQ5VZR2 741 aa21.8■■□□□ 1.08
TRA2A-212ENST00000621813 KCNH5Q8NCM2 988 aa21.8■■□□□ 1.08
TRA2A-212ENST00000621813 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
TRA2A-212ENST00000621813 CACNA1FO60840 1977 aa21.79■■□□□ 1.08
TRA2A-212ENST00000621813 SOS1Q07889 1333 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-212ENST00000621813 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 SEC24BO95487 1268 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-212ENST00000621813 MRE11P49959 708 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 PSME1Q06323 249 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 C14orf37Q86TY3 774 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 BABAM1Q9NWV8 329 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 FOXO3O43524 673 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
TRA2A-212ENST00000621813 RGS12O14924 1447 aa21.77■■□□□ 1.08
TRA2A-212ENST00000621813 SLC4A3P48751 1232 aa21.77■■□□□ 1.08
TRA2A-212ENST00000621813 IP6K1Q92551 441 aa21.77■■□□□ 1.08
TRA2A-212ENST00000621813 MAP3K5Q99683 1374 aa21.77■■□□□ 1.07
TRA2A-212ENST00000621813 KIF1AQ12756 1690 aa21.76■■□□□ 1.07
TRA2A-212ENST00000621813 KRT24Q2M2I5 525 aa21.75■■□□□ 1.07
TRA2A-212ENST00000621813 TBC1D32Q96NH3 1257 aa21.75■■□□□ 1.07
TRA2A-212ENST00000621813 BECN1Q14457 450 aa21.74■■□□□ 1.07
TRA2A-212ENST00000621813 FAM208AQ9UK61 1670 aaKnown RBP21.73■■□□□ 1.07
TRA2A-212ENST00000621813 SLIT3O75094 1523 aa21.73■■□□□ 1.07
TRA2A-212ENST00000621813 LNPKQ9C0E8 428 aa21.72■■□□□ 1.07
TRA2A-212ENST00000621813 C1orf115Q9H7X2 142 aa21.72■■□□□ 1.07
TRA2A-212ENST00000621813 RBM33Q96EV2 1170 aaKnown RBP21.72■■□□□ 1.07
TRA2A-212ENST00000621813 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
TRA2A-212ENST00000621813 SLC4A2P04920 1241 aa21.71■■□□□ 1.07
TRA2A-212ENST00000621813 SIRT2Q8IXJ6 389 aa21.71■■□□□ 1.07
TRA2A-212ENST00000621813 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.07
TRA2A-212ENST00000621813 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.07
TRA2A-212ENST00000621813 MSH6P52701 1360 aa21.7■■□□□ 1.07
TRA2A-212ENST00000621813 BMP2KLQ5H9B9 411 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms