RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 RBM25P49756 843 aaKnown RBP4.09□□□□□ -1.75
U1.39-201ENST00000621562 EIF4A2Q14240 407 aaKnown RBP4.09□□□□□ -1.75
U1.39-201ENST00000621562 BECN1Q14457 450 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 RRS1Q15050 365 aaKnown RBP4.09□□□□□ -1.75
U1.39-201ENST00000621562 BMP2KLQ5H9B9 411 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 TXNDC2Q86VQ3 553 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 C8orf58Q8NAV2 365 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 CFAP44Q96MT7 982 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 PNNQ9H307 717 aaKnown RBP4.09□□□□□ -1.75
U1.39-201ENST00000621562 BRPF3Q9ULD4 1205 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 SBNO1A3KN83 1393 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 NCAPD2Q15021 1401 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 SLIT3O75094 1523 aa4.09□□□□□ -1.75
U1.39-201ENST00000621562 KIF1AQ12756 1690 aa4.09□□□□□ -1.76
U1.39-201ENST00000621562 NUP188Q5SRE5 1749 aa4.09□□□□□ -1.76
U1.39-201ENST00000621562 SHANK3Q9BYB0 1731 aa4.09□□□□□ -1.76
U1.39-201ENST00000621562 ARFGEF2Q9Y6D5 1785 aa4.09□□□□□ -1.76
U1.39-201ENST00000621562 FSD2A1L4K1 749 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 CHL1O00533 1208 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 IPO8O15397 1037 aaKnown RBP4.08□□□□□ -1.76
U1.39-201ENST00000621562 ACEP12821 1306 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 GSPT1P15170 499 aaKnown RBP4.08□□□□□ -1.76
U1.39-201ENST00000621562 LTKP29376 864 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 FLT4P35916 1363 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 TJP1Q07157 1748 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 INTS3Q68E01 1043 aaKnown RBP4.08□□□□□ -1.76
U1.39-201ENST00000621562 CHD1LQ86WJ1 897 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 UBR2Q8IWV8 1755 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 DDX60Q8IY21 1712 aaKnown RBP4.08□□□□□ -1.76
U1.39-201ENST00000621562 SNX21Q969T3 373 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 COG3Q96JB2 828 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 ABCA3Q99758 1704 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 C22orf23Q9BZE7 217 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 LNPKQ9C0E8 428 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 SLKQ9H2G2 1235 aaPredicted RBP4.08□□□□□ -1.76
U1.39-201ENST00000621562 C1orf115Q9H7X2 142 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 CCDC61Q9Y6R9 512 aa4.08□□□□□ -1.76
U1.39-201ENST00000621562 ABCC6O95255 1503 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 MAP3K19Q56UN5 1328 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 IGSF1Q8N6C5 1336 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 TTC21AQ8NDW8 1320 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 SALL3Q9BXA9 1300 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 CD2BP2O95400 341 aaKnown RBP4.07□□□□□ -1.76
U1.39-201ENST00000621562 MCM4P33991 863 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 MFAP1P55081 439 aaKnown RBP4.07□□□□□ -1.76
U1.39-201ENST00000621562 CALD1Q05682 793 aaKnown RBP4.07□□□□□ -1.76
U1.39-201ENST00000621562 LMOD3Q0VAK6 560 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 MLECQ14165 292 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 DCTN1Q14203 1278 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 KRT24Q2M2I5 525 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 TWISTNBQ3B726 338 aaPredicted RBP4.07□□□□□ -1.76
U1.39-201ENST00000621562 TBC1D9Q6ZT07 1266 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 GCC1Q96CN9 775 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 STAG3Q9UJ98 1225 aa4.07□□□□□ -1.76
U1.39-201ENST00000621562 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.07□□□□□ -1.76
U1.39-201ENST00000621562 PAPPAQ13219 1627 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 PXDNQ92626 1479 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 MYH3P11055 1940 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 CHD4Q14839 1912 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 PLEKHM2Q8IWE5 1019 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 ANKRD44Q8N8A2 993 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 API5Q9BZZ5 524 aaKnown RBP4.06□□□□□ -1.76
U1.39-201ENST00000621562 DCTPP1Q9H773 170 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 UPF2Q9HAU5 1272 aaKnown RBP4.06□□□□□ -1.76
U1.39-201ENST00000621562 CHMP5Q9NZZ3 219 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 DAXXQ9UER7 740 aaPredicted RBP4.06□□□□□ -1.76
U1.39-201ENST00000621562 MYO5AQ9Y4I1 1855 aaKnown RBP4.06□□□□□ -1.76
U1.39-201ENST00000621562 ECM29Q5VYK3 1845 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 CASZ1Q86V15 1759 aa4.06□□□□□ -1.76
U1.39-201ENST00000621562 ADGRL3Q9HAR2 1447 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 PTPRCP08575 1304 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 FOXO3O43524 673 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 CDC45O75419 566 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 HSP90AB2PQ58FF8 381 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 TTC22Q5TAA0 569 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 CEP85Q6P2H3 762 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 G2E3Q7L622 706 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 OTUD7AQ8TE49 926 aaPredicted RBP4.05□□□□□ -1.76
U1.39-201ENST00000621562 CIZ1Q9ULV3 898 aaPredicted RBP4.05□□□□□ -1.76
U1.39-201ENST00000621562 WNK3Q9BYP7 1800 aa4.05□□□□□ -1.76
U1.39-201ENST00000621562 OVOS2A0A0G2JMS6 1433 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MST1RQ04912 1400 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 CEMIPQ8WUJ3 1361 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 ELL2O00472 640 aaPredicted RBP4.04□□□□□ -1.76
U1.39-201ENST00000621562 CYP2E1P05181 493 aaPredicted RBP4.04□□□□□ -1.76
U1.39-201ENST00000621562 RAB3GAP1Q15042 981 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MTHFSDQ2M296 383 aaKnown RBP4.04□□□□□ -1.76
U1.39-201ENST00000621562 ANKRD45Q5TZF3 282 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 CLEC17AQ6ZS10 378 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MCM10Q7L590 875 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 IL17RAQ96F46 866 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MEIS3Q99687 375 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 RBM42Q9BTD8 480 aaKnown RBP4.04□□□□□ -1.76
U1.39-201ENST00000621562 CHMP4BQ9H444 224 aaKnown RBP4.04□□□□□ -1.76
U1.39-201ENST00000621562 TBX22Q9Y458 520 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 ANKRD36CQ5JPF3 1778 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MRC1P22897 1456 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 TOGARAM1Q9Y4F4 1720 aa4.04□□□□□ -1.76
U1.39-201ENST00000621562 MAP3K5Q99683 1374 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms